Gfo_R014865 (Geospiza fortis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Gfo_R014865 T226234_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FGRRES_07914
M02132_2.00 		Fusarium graminearum
NNKACATGTHN
NDACATGTMNN		 PBM
Weirauch et al.(2014)
pTH6329 		0.657 0.475
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R014865 Homeodomain 5 46

Links

Other Homeodomain family TFs
Other Geospiza fortis TFs

151 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Afo_R009272 Aptenodytes forsteri Afo_R009272 I 0.867
ENSOARG00000016067 Ovis aries ENSOARG00000016067 I 0.867
Alligator_sinensis_CCG010381.1 Alligator sinensis Alligator_sinensis_CCG010381.1 I 0.867
Brh_R010356 Buceros rhinoceros Brh_R010356 I 0.867
Tal_R007088 Tyto alba Tal_R007088 I 0.867
ENSCSAG00000011743 Chlorocebus sabaeus ENSCSAG00000011743 I 0.867
MKX Tupaia belangeri ENSTBEG00000008150 I 0.867
MKX Procavia capensis ENSPCAG00000014719 I 0.861
estExt_fgenesh2_pg.C_2210037 Branchiostoma floridae estExt_fgenesh2_pg.C_2210037 I 0.842
ENSAPLG00000010674 Anas platyrhynchos ENSAPLG00000010674 I 0.833
CGI_10011802 Crassostrea gigas CGI_10011802 I 0.822
Ocbimv22006483m.g Octopus bimaculoides Ocbimv22006483m.g I 0.820
ENSONIG00000018672 Oreochromis niloticus ENSONIG00000018672 I 0.805
ENSPFOG00000013469 Poecilia formosa ENSPFOG00000013469 I 0.805
ISCW017111 Ixodes scapularis ISCW017111 I 0.805
ENSXMAG00000006967 Xiphophorus maculatus ENSXMAG00000006967 I 0.805
mkxb Tetraodon nigroviridis ENSTNIG00000007881 I 0.805
mkxb Takifugu rubripes ENSTRUG00000004166 I 0.805
Brh_R000015 Buceros rhinoceros Brh_R000015 I 0.800
IRX3 Dasypus novemcinctus ENSDNOG00000012985 I 0.794
D915_00592 Fasciola hepatica D915_00592 I 0.794
ENSMEUG00000004557 Macropus eugenii ENSMEUG00000004557 I 0.794
PXEA_0002454601 Protopolystoma xenopodis PXEA_0002454601 I 0.792
HelroG171177 Helobdella robusta HelroG171177 I 0.783
Aan_R003869 Calypte anna Aan_R003869 I 0.776
Ogr18478 Ophisaurus gracilis Ogr18478 I 0.765
Irx3 Rattus norvegicus ENSRNOG00000011533 I 0.765
ENSOANG00000029378 Ornithorhynchus anatinus ENSOANG00000029378 I 0.765
ENSMPUG00000007638 Mustela putorius furo ENSMPUG00000007638 I 0.765
SMAR007687 Strigamia maritima SMAR007687 I 0.765
Myotis_brandtii_Irx1_10035798 Myotis brandtii Myotis_brandtii_Irx1_10035798 I 0.765
SMTD_0002243001 Schistosoma mattheei SMTD_0002243001 I 0.765
ENSCAFG00000010422 Canis familiaris ENSCAFG00000010422 I 0.765
HmN_000922600 Hymenolepis microstoma HmN_000922600 I 0.764
HmN_000921700 Hymenolepis microstoma HmN_000921700 I 0.764
TTAC_0000670801 Hydatigera taeniaeformis TTAC_0000670801 I 0.764
TsM_000760900 Taenia solium TsM_000760900 I 0.764
Aqu1.225495 Amphimedon queenslandica Aqu1.225495 I 0.763
SMAR002833 Strigamia maritima SMAR002833 I 0.762
HNAJ_0001179801 Hymenolepis nana HNAJ_0001179801 I 0.762
Afo_R011092 Aptenodytes forsteri Afo_R011092 I 0.743
Aan_R015659 Calypte anna Aan_R015659 I 0.741
Gfo_R005354 Geospiza fortis Gfo_R005354 I 0.737
HMEL002096 Heliconius melpomene HMEL002096 I 0.736
D915_04768 Fasciola hepatica D915_04768 I 0.732
ECPE_0000388901 Echinostoma caproni ECPE_0000388901 I 0.732
ENSAMXG00000000335 Astyanax mexicanus ENSAMXG00000000335 I 0.731
irx7 Gasterosteus aculeatus ENSGACG00000011160 I 0.731
D915_05481 Fasciola hepatica D915_05481 I 0.730
SMUV_0000063001 Syphacia muris SMUV_0000063001 I 0.725
ENSPFOG00000006638 Poecilia formosa ENSPFOG00000006638 I 0.718
irx7 Takifugu rubripes ENSTRUG00000007926 I 0.718
ENSXMAG00000012663 Xiphophorus maculatus ENSXMAG00000012663 I 0.718
TASK_0000658901 Taenia asiatica TASK_0000658901 I 0.717
L596_g21727 Steinernema carpocapsae L596_g21727 I 0.712
L893_g31416 Steinernema glaseri L893_g31416 I 0.711
HelroG153600 Helobdella robusta HelroG153600 I 0.710
HelroG138488 Helobdella robusta HelroG138488 I 0.702
SCUD_0000714801 Schistosoma curassoni SCUD_0000714801 I 0.701
SMRZ_0000148301 Schistosoma margrebowiei SMRZ_0000148301 I 0.701
A_07284 Schistosoma haematobium A_07284 I 0.701
Sjc_0052220 Schistosoma japonicum Sjc_0052220 I 0.697
ATEG_05203 Aspergillus terreus CADATEAG00005116 I 0.694
DILT_0000254701 Diphyllobothrium latum DILT_0000254701 I 0.687
SPER_0001325101 Spirometra erinaceieuropaei SPER_0001325101 I 0.683
AGAP009986 Anopheles gambiae AGAP009986 D 0.683
AMAM020176 Anopheles maculatus AMAM020176 I 0.683
SSLN_0000846501 Schistocephalus solidus SSLN_0000846501 I 0.683
AARA003790 Anopheles arabiensis AARA003790 I 0.683
ENSSSCG00000009724 Sus scrofa ENSSSCG00000009724 I 0.682
ENSPTRG00000039451 Pan troglodytes ENSPTRG00000039451 I 0.682
SNOG_06363 Phaeosphaeria nodorum SNOG_06363 I 0.677
SNOG_06363 Stagonospora nodorum SNOG_06363 I 0.677
HelroG84083 Helobdella robusta HelroG84083 N 0.670
L892_g27282 Steinernema scapterisci L892_g27282 I 0.667
COCC4DRAFT_49159 Bipolaris maydis COCC4DRAFT_49159 I 0.660
COCMIDRAFT_53102 Bipolaris oryzae COCMIDRAFT_53102 I 0.660
estExt_Genewise1.C_110663 Cochliobolus heterostrophus C5 estExt_Genewise1.C_110663 I 0.660
COCVIDRAFT_49416 Bipolaris victoriae COCVIDRAFT_49416 I 0.660
SETTUDRAFT_162538 Setosphaeria turcica SETTUDRAFT_162538 I 0.660
COCCADRAFT_44321 Bipolaris zeicola COCCADRAFT_44321 I 0.660
FGRRES_17555 Fusarium graminearum FGRRES_17555 I 0.660
CapteG49895 Capitella teleta CapteG49895 I 0.659
CapteG88319 Capitella teleta CapteG88319 I 0.659
CapteG100741 Capitella teleta CapteG100741 I 0.658
FGRRES_07914 Fusarium graminearum FGRRES_07914 D 0.657
PTT_11733 Pyrenophora teres PTT_11733 I 0.656
CCM_02544 Cordyceps militaris CCM_02544 I 0.656
AB04741.1 Alternaria brassicicola AB04741.1 I 0.656
L898_g17064 Steinernema monticolum L898_g17064 I 0.653
COCSADRAFT_107886 Bipolaris sorokiniana COCSADRAFT_107886 I 0.652
Z519_11142 Cladophialophora bantiana Z519_11142 I 0.648
GPLIN_001377400 Globodera pallida GPLIN_001377400 N 0.632
FOXG_13545 Fusarium oxysporum FOXG_13545 I 0.627
FFUJ_12565 Fusarium fujikuroi FFUJ_12565 I 0.627
DOTSEDRAFT_78718 Dothistroma septosporum DOTSEDRAFT_78718 I 0.620
CapteG70907 Capitella teleta CapteG70907 I 0.608
mkxa Takifugu rubripes ENSTRUG00000004560 N 0.560
ENSONIG00000003727 Oreochromis niloticus ENSONIG00000003727 N 0.560
mkxa Gasterosteus aculeatus ENSGACG00000001691 N 0.560
MKX Ornithorhynchus anatinus ENSOANG00000006038 N 0.560
ENSPSIG00000004814 Pelodiscus sinensis ENSPSIG00000004814 N 0.560
mkx Xenopus tropicalis XB-GENE-853539 N 0.527
mkx.S Xenopus laevis XB-GENE-866492 N 0.527
MKX Equus caballus ENSECAG00000016778 N 0.527
ENSCPOG00000008252 Cavia porcellus ENSCPOG00000008252 N 0.527
MKX Callithrix jacchus ENSCJAG00000013033 N 0.527
ENSCAFG00000003859 Canis familiaris ENSCAFG00000003859 N 0.527
MKX Bos taurus ENSBTAG00000007678 N 0.527
mkxa Danio rerio ENSDARG00000075450 N 0.527
MKX Dasypus novemcinctus ENSDNOG00000001593 N 0.527
MKX Echinops telfairi ENSETEG00000006956 N 0.527
MKX Erinaceus europaeus ENSEEUG00000001597 N 0.527
Pvit_04112 Pogona vitticeps Pvit_04112 N 0.527
ENSFALG00000007156 Ficedula albicollis ENSFALG00000007156 N 0.527
Aan_R006492 Calypte anna Aan_R006492 N 0.527
ENSSHAG00000004876 Sarcophilus harrisii ENSSHAG00000004876 N 0.527
Mkx Rattus norvegicus ENSRNOG00000018938 N 0.527
ENSNLEG00000016980 Nomascus leucogenys ENSNLEG00000016980 N 0.527
ENSSTOG00000028463 Ictidomys tridecemlineatus ENSSTOG00000028463 N 0.527
Mkx Mus musculus ENSMUSG00000061013 N 0.527
ENSMPUG00000010587 Mustela putorius furo ENSMPUG00000010587 N 0.527
mkxa Tetraodon nigroviridis ENSTNIG00000008716 N 0.527
MKX Pteropus vampyrus ENSPVAG00000004779 N 0.527
MKX Pan troglodytes ENSPTRG00000002385 N 0.527
MKX Anolis carolinensis ENSACAG00000007829 N 0.527
MKX Otolemur garnettii ENSOGAG00000026996 N 0.527
MKX Oryctolagus cuniculus ENSOCUG00000010649 N 0.527
MKX Ochotona princeps ENSOPRG00000014689 N 0.527
ENSPANG00000022998 Papio anubis ENSPANG00000022998 N 0.527
ENSPPYG00000002173 Pongo abelii ENSPPYG00000002173 N 0.527
ENSPFOG00000006968 Poecilia formosa ENSPFOG00000006968 N 0.527
ENSTSYG00000013567 Tarsius syrichta ENSTSYG00000013567 N 0.527
ENSAMXG00000013305 Astyanax mexicanus ENSAMXG00000013305 N 0.527
ENSP00000364946-D1 Bos grunniens ENSP00000364946-D1 N 0.527
Cmyd_10008636 Chelonia mydas Cmyd_10008636 N 0.527
MKX Gorilla gorilla ENSGGOG00000016220 N 0.527
ENSP00000400896 Macaca fascicularis ENSP00000400896 N 0.527
MKX Homo sapiens ENSG00000150051 N 0.527
Ogr01627 Ophisaurus gracilis Ogr01627 N 0.527
Myotis_brandtii_MKX_10033050 Myotis brandtii Myotis_brandtii_MKX_10033050 N 0.527
ENSGMOG00000002773 Gadus morhua ENSGMOG00000002773 N 0.527
ENSLACG00000006723 Latimeria chalumnae ENSLACG00000006723 N 0.527
MKX Macaca mulatta ENSMMUG00000020660 N 0.527
MKX Monodelphis domestica ENSMODG00000008244 N 0.527
MKX Myotis lucifugus ENSMLUG00000012366 N 0.527
ENSMEUG00000011975 Macropus eugenii ENSMEUG00000011975 N 0.527
MKX Loxodonta africana ENSLAFG00000006126 N 0.527
ENSLOCG00000007475 Lepisosteus oculatus ENSLOCG00000007475 N 0.527
MKX Felis catus ENSFCAG00000004227 N 0.527
MKX Taeniopygia guttata ENSTGUG00000001094 N 0.496