Hsal_09224--XP_392297.3_APIME (Harpegnathos saltator)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Hsal_09224--XP_392297.3_APIME T226298_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
exd
M06487_2.00
Drosophila melanogaster
YRTCAAAN

NTTTGAYR
B1H
Mathelier et al.(2014)
MA0222.1
0.867 1.000
exd
M06243_2.00
Drosophila melanogaster
YRTCAAAN

NTTTGAYR
B1H
Zhu et al.(2011)
Exd_Cell_FBgn0000611
0.867 1.000
exd
M06244_2.00
Drosophila melanogaster
NWRNWYNAAA

TTTNRWNYWN
B1H
Zhu et al.(2011)
exd_FlyReg_FBgn0000611
0.867 1.000
exd
M06245_2.00
Drosophila melanogaster
NDTGAYRW

WYRTCAHN
B1H
Zhu et al.(2011)
exd_SOLEXA_2_FBgn0000611
0.867 1.000
exd
M06246_2.00
Drosophila melanogaster
NNDTGAYR

YRTCAHNN
B1H
Zhu et al.(2011)
Exd_SOLEXA_FBgn0000611
0.867 1.000
Pbx1
M00513_2.00
Mus musculus
NNDKANNNN

NNNNTMHNN
PBM
Berger et al.(2008)
Pbx1_3203
0.822 0.947
PBX1
M05362_2.00
Homo sapiens
NTGATKGAYR

YRTCMATCAN
SELEX
Yin et al.(2017)
PBX1_eDBD_HT-SELEX
0.822 0.947
PBX1
M05364_2.00
Homo sapiens
DTGMTKGRYN

NRYCMAKCAH
SELEX
Yin et al.(2017)
PBX1_FL_HT-SELEX
0.822 0.947
PBX1
M02685_2.00
Homo sapiens
WWTGATTGATND

HNATCAATCAWW
SELEX
Mathelier et al.(2014)
MA0070.1
0.822 0.947
PBX2
M08134_2.00
Homo sapiens
NWGAKTGACABN

NVTGTCAMTCWN
ChIP-seq
Mathelier et al.(2014)
MA1113.1
0.822 0.947
PBX1
M09164_2.00
Homo sapiens
DGABTGRCRG

CYGYCAVTCH
Misc
Kulakovskiy et al.(2013)
PBX1_HUMAN.H11MO.0.A
0.822 0.947
PBX2
M09165_2.00
Homo sapiens
KRVHKTGATTGAWKN

NMWTCAATCAMDBYM
Misc
Kulakovskiy et al.(2013)
PBX2_HUMAN.H11MO.0.C
0.822 0.947
Pbx2
M09199_2.00
Mus musculus
KRVHKTGATTGAWKN

NMWTCAATCAMDBYM
Misc
Kulakovskiy et al.(2013)
PBX2_MOUSE.H11MO.0.C
0.822 0.947
PBX1
M09561_2.00
Homo sapiens
TGABTGACAGSC

GSCTGTCAVTCA
Misc
Heinz et al.(2010)
MCF7-PBX1_GSE28007
0.822 0.947
PBX1
M10748_2.00
Homo sapiens
WTKATTRDT

AHYAATMAW
Transfac
Matys et al.(2006)
V$PBX1_01
0.822 0.947
PBX1
M10749_2.00
Homo sapiens
DNHTTGATTGATKDB

VHMATCAATCAADNH
Transfac
Matys et al.(2006)
V$PBX1_02
0.822 0.947
PBX1
M10750_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PBX1_03
0.822 0.947
PBX1
M10751_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PBX1_05
0.822 0.947
PBX1
M10752_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PBX1_10
0.822 0.947
PBX1
M10753_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PBX1_Q3
0.822 0.947
PBX1
M05363_2.00
Homo sapiens
DTGAKKGAYG

CRTCMMTCAH
SELEX
Yin et al.(2017)
PBX1_eDBD_Methyl-HT-SELEX
0.822 0.947
PBX1
M05365_2.00
Homo sapiens
MRTCAATCMH

DKGATTGAYK
SELEX
Yin et al.(2017)
PBX1_FL_Methyl-HT-SELEX
0.822 0.947
pbx4
M02110_2.00
Tetraodon nigroviridis
TTGAYGDV

BHCRTCAA
PBM
Weirauch et al.(2014)
pTH6425
0.822 0.930
Pbx3
M09205_2.00
Mus musculus
BBBTGATTGRYNDN

NHNRYCAATCAVVV
Misc
Kulakovskiy et al.(2013)
PBX3_MOUSE.H11MO.0.A
0.820 0.947
PBX4
M00277_2.00
Homo sapiens
NNDDWHDNNN

NNNHDWHHNN
PBM
Barrera et al.(2016)
PBX4_REF
0.770 0.895
PBX4
M10649_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PBX4_01
0.770 0.895
CBG10835
M01243_2.00
Caenorhabditis briggsae
NNTKAYDNN

NNHRTMANN
PBM
Lambert et al.(2019)
pTH11444
0.646 0.544
PBX4
M00276_2.00
Homo sapiens
NYTAATTADNN

NNHTAATTARN
PBM
Barrera et al.(2016)
PBX4_R215Q
0.632 0.877
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Hsal_09224--XP_392297.3_APIME Homeodomain 233 292

Links

Other Homeodomain family TFs
Other Harpegnathos saltator TFs

433 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000013375 Ailuropoda melanoleuca ENSAMEG00000013375 I 0.000
ENSCSAG00000001819 Chlorocebus sabaeus ENSCSAG00000001819 I 0.000
ENSMPUG00000002709 Mustela putorius furo ENSMPUG00000002709 I 0.000
ENSNLEG00000012466 Nomascus leucogenys ENSNLEG00000012466 I 0.000
ENSOARG00000008447 Ovis aries ENSOARG00000008447 I 0.000
ENSP00000333725 Macaca fascicularis ENSP00000333725 I 0.000
ENSP00000381304-D19 Bos grunniens ENSP00000381304-D19 I 0.000
ENSPANG00000011322 Papio anubis ENSPANG00000011322 I 0.000
ENSPPYG00000005151 Pongo abelii ENSPPYG00000005151 I 0.000
ENSSTOG00000008431 Ictidomys tridecemlineatus ENSSTOG00000008431 I 0.000
ENSTSYG00000013291 Tarsius syrichta ENSTSYG00000013291 I 0.000
Myotis_brandtii_ZNF26_10005226 Myotis brandtii Myotis_brandtii_ZNF26_10005226 I 0.000
ZNF26 Sus scrofa ENSSSCG00000009730 I 0.000
ZNF26 Tupaia belangeri ENSTBEG00000010158 I 0.000
ZNF26 Tursiops truncatus ENSTTRG00000010664 I 0.000
ZNF26 Dasypus novemcinctus ENSDNOG00000039327 I 0.000
ZNF26 Callithrix jacchus ENSCJAG00000013090 I 0.000
ZNF26 Sorex araneus ENSSARG00000013092 I 0.000
ZNF26 Pteropus vampyrus ENSPVAG00000002106 I 0.000
ZNF26 Pan troglodytes ENSPTRG00000023082 I 0.000
ZNF26 Procavia capensis ENSPCAG00000014220 I 0.000
ZNF26 Felis catus ENSFCAG00000002509 I 0.000
ZNF26 Otolemur garnettii ENSOGAG00000024271 I 0.000
ZNF26 Oryctolagus cuniculus ENSOCUG00000029684 I 0.000
ZNF26 Homo sapiens ENSG00000198393 D 0.000
ZNF26 Gorilla gorilla ENSGGOG00000004068 I 0.000
ZNF26 Macaca mulatta ENSMMUG00000013868 I 0.000