Pvit_11713 (Pogona vitticeps)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Pvit_11713 T226778_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
VSX1
M03087_2.00
Homo sapiens
YTAATTAN

NTAATTAR
SELEX
Jolma et al.(2013)
VSX1_1
0.722 0.435
VSX1
M03088_2.00
Homo sapiens
NNYAATTRRBN

NVYYAATTRNN
SELEX
Jolma et al.(2013)
VSX1_2
0.722 0.435
VSX1
M04941_2.00
Homo sapiens
YYAATTRN

NYAATTRR
SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX
0.722 0.435
VSX1
M04944_2.00
Homo sapiens
NTAATTRS

SYAATTAN
SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX
0.722 0.435
VSX1
M05869_2.00
Homo sapiens
DGCTAATTAN

NTAATTAGCH
SMiLE-seq
Isakova et al.(2017)
VSX1
0.722 0.435
VSX1
M04942_2.00
Homo sapiens
NTAAYGMN

NKCRTTAN
SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1
0.722 0.435
VSX1
M04943_2.00
Homo sapiens
YYAATTRN

NYAATTRR
SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2
0.722 0.435
VSX1
M04945_2.00
Homo sapiens
NTAATTRG

CYAATTAN
SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1
0.722 0.435
VSX1
M04946_2.00
Homo sapiens
NTAAYGAN

NTCRTTAN
SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2
0.722 0.435
VAX1
M03168_2.00
Homo sapiens
YTAATKAN

NTMATTAR
SELEX
Jolma et al.(2013)
VAX1_1
0.685 0.522
VAX1
M05182_2.00
Homo sapiens
BTAATTRN

NYAATTAV
SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX
0.685 0.522
VAX1
M05183_2.00
Homo sapiens
BTMATKRN

NYMATKAV
SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX
0.685 0.522
Evx2
M00393_2.00
Mus musculus
NNTAAYNN

NNRTTANN
PBM
Berger et al.(2008)
Evx2_2645
0.377 1.000
Evx1
M00395_2.00
Mus musculus
NTAATBDNN

NNHVATTAN
PBM
Berger et al.(2008)
Evx1_3952
0.377 1.000
EVX1
M03102_2.00
Homo sapiens
NNTAATBRBN

NVYVATTANN
SELEX
Jolma et al.(2013)
EVX1_1
0.377 1.000
EVX2
M03215_2.00
Homo sapiens
NNTAATBRBN

NVYVATTANN
SELEX
Jolma et al.(2013)
EVX2_1
0.377 1.000
EVX1
M04985_2.00
Homo sapiens
VTAATKAB

VTMATTAB
SELEX
Yin et al.(2017)
EVX1_eDBD_HT-SELEX
0.377 1.000
EVX2
M05295_2.00
Homo sapiens
NTAATKAN

NTMATTAN
SELEX
Yin et al.(2017)
EVX2_eDBD_HT-SELEX
0.377 1.000
EVX2
M09158_2.00
Homo sapiens
NBTTTATKRCHNN

NNDGYMATAAAVN
Misc
Kulakovskiy et al.(2013)
EVX2_HUMAN.H11MO.0.A
0.377 1.000
Evx1
M09174_2.00
Mus musculus
WGATTTATDRBHN

NDVYHATAAATCW
Misc
Kulakovskiy et al.(2013)
EVX1_MOUSE.H11MO.0.C
0.377 1.000
Evx2
M09173_2.00
Mus musculus
BTTTATKRCHBN

NVDGYMATAAAV
Misc
Kulakovskiy et al.(2013)
EVX2_MOUSE.H11MO.0.A
0.377 1.000
EVX2
M10736_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EVX2_04
0.377 1.000
EVX1
M04986_2.00
Homo sapiens
NTMATKAN

NTMATKAN
SELEX
Yin et al.(2017)
EVX1_eDBD_Methyl-HT-SELEX_1
0.377 1.000
EVX1
M04987_2.00
Homo sapiens
HTWAYGAB

VTCRTWAD
SELEX
Yin et al.(2017)
EVX1_eDBD_Methyl-HT-SELEX_2
0.377 1.000
EVX2
M05296_2.00
Homo sapiens
NTAATKAN

NTMATTAN
SELEX
Yin et al.(2017)
EVX2_eDBD_Methyl-HT-SELEX_1
0.377 1.000
EVX2
M05297_2.00
Homo sapiens
HTAAYGAB

VTCRTTAD
SELEX
Yin et al.(2017)
EVX2_eDBD_Methyl-HT-SELEX_2
0.377 1.000
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_11713 Homeodomain 183 228

Links

Other Homeodomain family TFs
Other Pogona vitticeps TFs

Invalid Input OrderBy

1327 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action