CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Tal_R002601
(
Tyto alba
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
Tal_R002601
T226863_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Meis2
M00437_2.00
Mus musculus
NTGACANNN
NNNTGTCAN
PBM
Berger et al.(2008)
Mrg1_2246
0.447
1.000
MEIS2
M03147_2.00
Homo sapiens
WTGACAGSTGTCAM
KTGACASCTGTCAW
SELEX
Jolma et al.(2013)
MEIS2_1
0.447
1.000
MEIS2
M03148_2.00
Homo sapiens
DTGACAGS
SCTGTCAH
SELEX
Jolma et al.(2013)
MEIS2_2
0.447
1.000
Meis2
M03261_2.00
Mus musculus
NTGACAN
NTGTCAN
SELEX
Jolma et al.(2013)
Meis2_1
0.447
1.000
Meis2
M03262_2.00
Mus musculus
TGACAGSTGTCA
TGACASCTGTCA
SELEX
Jolma et al.(2013)
Meis2_2
0.447
1.000
MEIS2
M02740_2.00
Homo sapiens
TGACASSTGTC
GACASSTGTCA
SELEX
Jolma et al.(2010)
MEIS2_dimer
0.447
1.000
MEIS2
M02741_2.00
Homo sapiens
GGACAKNT
ANMTGTCC
SELEX
Jolma et al.(2010)
MEIS2_monomer
0.447
1.000
MEIS2
M05138_2.00
Homo sapiens
TGACASSTGTCA
TGACASSTGTCA
SELEX
Yin et al.(2017)
MEIS2_eDBD_HT-SELEX
0.447
1.000
MEIS2
M05140_2.00
Homo sapiens
TGACASSTGTCA
TGACASSTGTCA
SELEX
Yin et al.(2017)
MEIS2_FL_HT-SELEX
0.447
1.000
MEIS2
M09143_2.00
Homo sapiens
HTGACAGBTKTBM
KVAMAVCTGTCAD
Misc
Kulakovskiy et al.(2013)
MEIS2_HUMAN.H11MO.0.B
0.447
1.000
Meis2
M09189_2.00
Mus musculus
HTGACAGBTKTBM
KVAMAVCTGTCAD
Misc
Kulakovskiy et al.(2013)
MEIS2_MOUSE.H11MO.0.B
0.447
1.000
MEIS2
M05139_2.00
Homo sapiens
YGACASSYGHCR
YGDCRSSTGTCR
SELEX
Yin et al.(2017)
MEIS2_eDBD_Methyl-HT-SELEX
0.447
1.000
MEIS2
M05141_2.00
Homo sapiens
TGACASSTGTCA
TGACASSTGTCA
SELEX
Yin et al.(2017)
MEIS2_FL_Methyl-HT-SELEX
0.447
1.000
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Tal_R002601
Homeodomain
61
110
QKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNW
Links
Other
Homeodomain
family TFs
Other
Tyto alba
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy