evm.TU.supercontig_139.11 (Carica papaya)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 evm.TU.supercontig_139.11 T228530_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WUS
M06905_2.00 		Arabidopsis thaliana
TRAWTGAWTGA
TCAWTCAWTYA		 Dap-seq
OMalley et al.(2016)
WUS1_col_a 		0.724 0.702
WUS
M06906_2.00 		Arabidopsis thaliana
TGAWTGAWTGW
WCAWTCAWTCA		 Dap-seq
OMalley et al.(2016)
WUS1_colamp_a 		0.724 0.702
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_139.11 Homeodomain 5 66

Links

Other Homeodomain family TFs
Other Carica papaya TFs

Invalid Input OrderBy

448 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action