MDP0000204889 (Malus domestica)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 MDP0000204889 T229012_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ATH1
M10627_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ATH1_01
0.810 0.714
Q5EVH4_OIKDI
M02227_2.00
Oikopleura dioica
NTGACAKN

NMTGTCAN
PBM
Weirauch et al.(2014)
pTH6041
0.626 0.551
MEIS3
M03093_2.00
Homo sapiens
DTGACANN

NNTGTCAH
SELEX
Jolma et al.(2013)
MEIS3_1
0.602 0.408
MEIS3
M03094_2.00
Homo sapiens
TGACAGSTGTCA

TGACASCTGTCA
SELEX
Jolma et al.(2013)
MEIS3_2
0.602 0.408
MEIS3
M04951_2.00
Homo sapiens
TGWCABVTGWCA

TGWCABVTGWCA
SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX
0.602 0.408
MEIS3
M04952_2.00
Homo sapiens
YGWCABVTGWCR

YGWCABVTGWCR
SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX
0.602 0.408
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000204889 Homeodomain 399 450

Links

Other Homeodomain family TFs
Other Malus domestica TFs

1001 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
YOX1 Saccharomyces cerevisiae YML027W D 0.000
ATEG_04171 Aspergillus terreus CADATEAG00009984 D 0.000
PVAR5_3236 Byssochlamys spectabilis PVAR5_3236 I 0.000
PDE_04931 Penicillium oxalicum PDE_04931 I 0.000
PDIP_75510 Penicillium digitatum PDIP_75510 I 0.000
PEX1_077160 Penicillium expansum PEX1_077160 I 0.000
PGUG_00382 Meyerozyma guilliermondii PGUG_00382 I 0.000
PICST_65833 Scheffersomyces stipitis PICST_65833 I 0.000
SBOR_0341 Sclerotinia borealis SBOR_0341 I 0.000
PITC_036250 Penicillium italicum PITC_036250 I 0.000
PMAA_076490 Talaromyces marneffei PMAA_076490 I 0.000
PV04_10601 Capronia semiimmersa PV04_10601 I 0.000
PV09_05311 Verruconis gallopava PV09_05311 I 0.000
PCH_Pc18g00190 Penicillium rubens PCH_Pc18g00190 I 0.000
PABG_04211 Paracoccidioides brasiliensis PABG_04211 I 0.000
Kpol_1004p50 Vanderwaltozyma polyspora Kpol_1004p50 I 0.000
Kpol_1023p80 Vanderwaltozyma polyspora Kpol_1023p80 I 0.000
KUCA_T00000773001 Kuraishia capsulata KUCA_T00000773001 I 0.000
LALA0_S09e00364g Lachancea lanzarotensis LALA0_S09e00364g I 0.000
LELG_05443 Lodderomyces elongisporus LELG_05443 I 0.000
LEMA_P079180.1 Leptosphaeria maculans LEMA_P079180.1 I 0.000
M407DRAFT_21315 Tulasnella calospora M407DRAFT_21315 I 0.000
M437DRAFT_82573 Aureobasidium melanogenum M437DRAFT_82573 I 0.000
M438DRAFT_345498 Aureobasidium pullulans M438DRAFT_345498 I 0.000
MGYG_00197 Microsporum gypseum MGYG_00197 I 0.000
MPH_01872 Macrophomina phaseolina MPH_01872 I 0.000
PAAG_11867 Paracoccidioides sp lutzii PAAG_11867 I 0.000
SEPMUDRAFT_122411 Sphaerulina musiva SEPMUDRAFT_122411 I 0.000
SETTUDRAFT_126230 Setosphaeria turcica SETTUDRAFT_126230 I 0.000
SNOG_10542 Phaeosphaeria nodorum SNOG_10542 I 0.000
PMAA_076490 Penicillium marneffei PMAA_076490 I 0.000
Z517_12283 Fonsecaea pedrosoi Z517_12283 I 0.000
Z518_06261 Rhinocladiella mackenziei Z518_06261 I 0.000
Z519_06193 Cladophialophora bantiana Z519_06193 I 0.000
estExt_fgenesh1_pm.C_chr_5.10316 Pichia stipitis estExt_fgenesh1_pm.C_chr_5.10316 I 0.000
estExt_Genewise1.C_11468 Cochliobolus heterostrophus C5 estExt_Genewise1.C_11468 I 0.000
17440_YML027W Saccharomyces paradoxus 17440_YML027W I 0.000
AB00260.1 Alternaria brassicicola AB00260.1 I 0.000
fgenesh1_pm.00866_#_491 Aspergillus carbonarius fgenesh1_pm.00866_#_491 I 0.000
KLTH0G04686g Kluyveromyces thermotolerans KLTH0G04686g I 0.000
Kwal_18450 Kluyveromyces waltii Kwal_18450 I 0.000
V499_00333 Pseudogymnoascus pannorum V499_00333 I 0.000
UV8b_5567 Ustilaginoidea virens UV8b_5567 I 0.000
SPAPADRAFT_57590 Spathaspora passalidarum SPAPADRAFT_57590 I 0.000
SS1G_04522 Sclerotinia sclerotiorum SS1G_04522 I 0.000
SU7_2475 Saccharomyces arboricola SU7_2475 I 0.000
TBLA_0E02960 Tetrapisispora blattae TBLA_0E02960 I 0.000
TDEL_0A04320 Torulaspora delbrueckii TDEL_0A04320 I 0.000
TEQG_06412 Trichophyton equinum TEQG_06412 I 0.000
TESG_00798 Trichophyton tonsurans TESG_00798 I 0.000
TPHA_0D02630 Tetrapisispora phaffii TPHA_0D02630 I 0.000
TSTA_096850 Talaromyces stipitatus TSTA_096850 I 0.000
U727_00433932271 Penicillium solitum U727_00433932271 I 0.000
UREG_04594 Uncinocarpus reesii UREG_04594 I 0.000
Pc18g00190 Penicillium chrysogenum Pc18g00190 I 0.000
CIMG_09634 Coccidioides immitis CIMG_09634 I 0.000
BN7_6497 Wickerhamomyces ciferrii BN7_6497 I 0.000
ACLA_040020 Aspergillus clavatus CADACLAG00003199 I 0.000
CADAFLAG00002414 Aspergillus flavus CADAFLAG00002414 I 0.000
CADANGAG00002342 Aspergillus niger CADANGAG00002342 I 0.000
CADAORAG00001369 Aspergillus oryzae CADAORAG00001369 I 0.000
CANTEDRAFT_113041 Candida tenuis CANTEDRAFT_113041 I 0.000
CaO19.7017 Candida albicans CaO19.7017 I 0.000
CD36_70900 Candida dubliniensis CD36_70900 I 0.000
CLUG_04271 Clavispora lusitaniae CLUG_04271 I 0.000
COCC4DRAFT_127765 Bipolaris maydis COCC4DRAFT_127765 I 0.000
COCCADRAFT_90442 Bipolaris zeicola COCCADRAFT_90442 I 0.000
Bcin01g06200 Botrytis cinerea Bcin01g06200 I 0.000
AUEXF2481DRAFT_40998 Aureobasidium subglaciale AUEXF2481DRAFT_40998 I 0.000
AOL_s00075g18 Arthrobotrys oligospora AOL_s00075g18 I 0.000
CLUG_04271 Candida lusitaniae CLUG_04271 I 0.000
CPAG_00635 Candida parapsilosis CPAG_00635 I 0.000
MCYG_03024 Microsporum canis MCYG_03024 I 0.000
PGUG_00382 Candida guilliermondii PGUG_00382 I 0.000
SNOG_10542 Stagonospora nodorum SNOG_10542 I 0.000
SPPG_01429 Spizellomyces punctatus SPPG_01429 I 0.000
A1O1_06861 Capronia coronata A1O1_06861 I 0.000
A1O3_10315 Capronia epimyces A1O3_10315 I 0.000
A1O5_07631 Cladophialophora psammophila A1O5_07631 I 0.000
A1O7_09958 Cladophialophora yegresii A1O7_09958 I 0.000
A1O9_06349 Exophiala aquamarina A1O9_06349 I 0.000
COCMIDRAFT_2266 Bipolaris oryzae COCMIDRAFT_2266 I 0.000
COCSADRAFT_125307 Bipolaris sorokiniana COCSADRAFT_125307 I 0.000
H101_06850 Trichophyton interdigitale H101_06850 I 0.000
H102_08770 Trichophyton rubrum H102_08770 I 0.000
H105_08795 Trichophyton soudanense H105_08795 I 0.000
HCBG_03004 Histoplasma capsulatum HCBG_03004 I 0.000
HMPREF1120_01778 Exophiala dermatitidis HMPREF1120_01778 I 0.000
HPODL_02118 Ogataea parapolymorpha HPODL_02118 I 0.000
J056_000182 Wallemia ichthyophaga J056_000182 I 0.000
JL09_g4323 Pichia kudriavzevii JL09_g4323 I 0.000
KAFR_0C05600 Kazachstania africana KAFR_0C05600 I 0.000
KLLA0_B01584g Kluyveromyces lactis KLLA0_B01584g I 0.000
KLTH0G04686g Lachancea thermotolerans KLTH0G04686g I 0.000
H072_1197 Dactylellina haptotyla H072_1197 I 0.000
GSTUM_00011138001 Tuber melanosporum GSTUM_00011138001 I 0.000
GMDG_01589 Pseudogymnoascus destructans GMDG_01589 I 0.000
COCVIDRAFT_88516 Bipolaris victoriae COCVIDRAFT_88516 I 0.000
CORT_0H00310 Candida orthopsilosis CORT_0H00310 I 0.000
CPC735_023880 Coccidioides posadasii CPC735_023880 I 0.000
CTRG_04888 Candida tropicalis CTRG_04888 I 0.000
DEHA2F22286g Debaryomyces hansenii DEHA2F22286g I 0.000
DOTSEDRAFT_142040 Dothistroma septosporum DOTSEDRAFT_142040 I 0.000
DRE_07453 Drechslerella stenobrocha DRE_07453 I 0.000
EPUS_07220 Endocarpon pusillum EPUS_07220 I 0.000
EURHEDRAFT_516147 Aspergillus ruber EURHEDRAFT_516147 I 0.000
G210_2310 Candida maltosa G210_2310 I 0.000
G647_08323 Cladophialophora carrionii G647_08323 I 0.000
KNAG_0B03460 Kazachstania naganishii KNAG_0B03460 I 0.000