CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
MDP0000209424
(
Malus domestica
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
MDP0000209424
T229018_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000209424
Homeodomain
66
122
KRPRDLLNPKAIKYMQSIFSIKDTISKKESRELSALFGVTVTQVRDFFNSQRSRVKK
Links
Other
Homeodomain
family TFs
Other
Malus domestica
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pm019976
Prunus mume
Pm019976
N
0.840
PRUPE_ppa000815mg
Prunus persica
PRUPE_ppa000815mg
N
0.840
MDP0000161239
Malus domestica
MDP0000161239
N
0.838
29647.m001998
Ricinus communis
29647.m001998
N
0.831
gene24915-v1.0-hybrid
Fragaria vesca
gene24915-v1.0-hybrid
N
0.825
Eucgr.H01192
Eucalyptus grandis
Eucgr.H01192
N
0.811
Cla014917
Citrullus lanatus
Cla014917
N
0.792
Cucsa.025330
Cucumis sativus
Cucsa.025330
N
0.792
GLYMA19G39620
Glycine max
GLYMA19G39620
N
0.760
GLYMA03G36970
Glycine max
GLYMA03G36970
N
0.760
Gorai.004G088100
Gossypium raimondii
Gorai.004G088100
N
0.723
cassava29582.valid.m1
Manihot esculenta
cassava29582.valid.m1
N
0.606
cassava29583.valid.m1
Manihot esculenta
cassava29583.valid.m1
N
0.606