Thhalv10000281m.g (Eutrema salsugineum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Thhalv10000281m.g T229529_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HAT22
M06926_2.00
Arabidopsis thaliana
NNYAATCATT

AATGATTRNN
Dap-seq
OMalley et al.(2016)
HAT22_col_a
0.862 0.912
HAT2
M06929_2.00
Arabidopsis thaliana
NHAATGATTRN

NYAATCATTDN
Dap-seq
OMalley et al.(2016)
HAT2_colamp_a
0.793 0.772
HAT2
M06930_2.00
Arabidopsis thaliana
WNYAATCATWD

HWATGATTRNW
Dap-seq
OMalley et al.(2016)
HAT2_col_v31
0.793 0.772
HAT1
M02047_2.00
Arabidopsis thaliana
NMATGATTRN

NYAATCATKN
PBM
Weirauch et al.(2014)
pTH8107
0.792 0.737
HAT1
M06922_2.00
Arabidopsis thaliana
NHAATGATTRNNWDW

WHWNNYAATCATTDN
Dap-seq
OMalley et al.(2016)
HAT1_col_a
0.792 0.737
HAT1
M06923_2.00
Arabidopsis thaliana
NYAATCATTDN

NHAATGATTRN
Dap-seq
OMalley et al.(2016)
HAT1_colamp_a
0.792 0.737
ATHB-X
M06902_2.00
Arabidopsis thaliana
HHAATRATTRN

NYAATYATTDD
Dap-seq
OMalley et al.(2016)
ATHB18_col_a
0.773 0.737
ATHB-X
M06903_2.00
Arabidopsis thaliana
NYAATGATTRV

BYAATCATTRN
Dap-seq
OMalley et al.(2016)
ATHB18_colamp_a
0.773 0.737
HAT3
M00728_2.00
Arabidopsis thaliana
DTGATTRV

BYAATCAH
PBM
Chang et al.(2013)
pTH7400
0.764 0.807
ATHB-4
M01065_2.00
Arabidopsis thaliana
NBMTGCATRNN

NNYATGCAKVN
PBM
Sullivan et al.(2014)
pTH8184
0.764 0.789
ATHB-4
M02042_2.00
Arabidopsis thaliana
NNWTNATTRN

NYAATNAWNN
PBM
Weirauch et al.(2014)
pTH8667
0.764 0.789
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10000281m Homeodomain 112 168

Links

Other Homeodomain family TFs
Other Eutrema salsugineum TFs

695 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
YLR278C Saccharomyces cerevisiae YLR278C D 0.000
AACERI_AaceriAGR280C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAGR280C I 0.000
TBLA_0E01110 Tetrapisispora blattae TBLA_0E01110 I 0.000
TPHA_0F02630 Tetrapisispora phaffii TPHA_0F02630 I 0.000
ZBAI_09347 Zygosaccharomyces bailii ZBAI_09347 I 0.000
ZYRO0D14432g Zygosaccharomyces rouxii ZYRO0D14432g I 0.000
Scas_Contig526.3 Saccharomyces castellii Scas_Contig526.3 I 0.000
15796_YLR278C Saccharomyces paradoxus 15796_YLR278C I 0.000
16783_Multiple Saccharomyces bayanus 16783_Multiple I 0.000
23508_YLR278C Saccharomyces mikatae 23508_YLR278C I 0.000
KLTH0G15180g Kluyveromyces thermotolerans KLTH0G15180g I 0.000
SU7_2306 Saccharomyces arboricola SU7_2306 I 0.000
NDAI_0D02730 Naumovozyma dairenensis NDAI_0D02730 I 0.000
NCAS_0F00370 Naumovozyma castellii NCAS_0F00370 I 0.000
AGOS_AGR280C Ashbya gossypii AGOS_AGR280C I 0.000
CAGL0G09757g Candida glabrata CAGL0G09757g I 0.000
Ecym_3112 Eremothecium cymbalariae Ecym_3112 I 0.000
KAFR_0A04940 Kazachstania africana KAFR_0A04940 I 0.000
SAKL0A08074g Lachancea kluyveri SAKL0A08074g I 0.000
KLTH0G15180g Lachancea thermotolerans KLTH0G15180g I 0.000
KNAG_0F03040 Kazachstania naganishii KNAG_0F03040 I 0.000
KNAG_0M00970 Kazachstania naganishii KNAG_0M00970 I 0.000
Kpol_345p3 Vanderwaltozyma polyspora Kpol_345p3 I 0.000
TDEL_0G03970 Torulaspora delbrueckii TDEL_0G03970 N 0.000
BN7_1291 Wickerhamomyces ciferrii BN7_1291 N 0.000
KLLA0_C04620g Kluyveromyces lactis KLLA0_C04620g N 0.000