|
HHAL007461-PA
(Halyomorpha halys)
Homeodomain
|
TF Information |
Pfam ID |
Interpro ID |
Gene ID |
CIS-BP ID |
Sequence source |
PF00046 (Homeobox) |
IPR001356 |
HHAL007461-PA |
T229855_2.00 |
Misc (2018-Jan-19) |
NCBI Gene Info:This gene encodes a tumor suppressor protein containing transcriptional activation, DNA binding, and oligomerization domains. The encoded protein responds to diverse cellular stresses to regulate expression of target genes, thereby inducing cell cycle arrest, apoptosis, senescence, DNA repair, or changes in metabolism. Mutations in this gene are associated with a variety of human cancers, including hereditary cancers such as Li-Fraumeni syndrome. Alternative splicing of this gene and the use of alternate promoters result in multiple transcript variants and isoforms. Additional isoforms have also been shown to result from the use of alternate translation initiation codons from identical transcript variants (PMIDs: 12032546, 20937277). [provided by RefSeq, Dec 2016] |
Directly determined binding motifs |
Name/Motif ID |
Species |
Forward |
Reverse |
Type/Study/Study ID |
SR Score |
DBD Identity |
No direct experiments |
|
|
|
|
|
Motifs from related TFs |
Name/Motif ID |
Species |
Forward |
Reverse |
Type/Study/Study ID |
SR Score |
DBD Identity |
vnd
M06551_2.00 |
Drosophila melanogaster |
WYTCAAGTR |
YACTTGARW |
B1H
Mathelier et al.(2014)
MA0253.1
|
0.863
|
0.930
|
vnd
M06377_2.00 |
Drosophila melanogaster |
WYTCAAGTR |
YACTTGARW |
B1H
Zhu et al.(2011)
Vnd_Cell_FBgn0003986
|
0.863
|
0.930
|
vnd
M06378_2.00 |
Drosophila melanogaster |
KYTSAAGWGY |
RCWCTTSARM |
B1H
Zhu et al.(2011)
vnd_FlyReg_FBgn0003986
|
0.863
|
0.930
|
vnd
M06379_2.00 |
Drosophila melanogaster |
BTBAAGTR |
YACTTVAV |
B1H
Zhu et al.(2011)
Vnd_SOLEXA_FBgn0003986
|
0.863
|
0.930
|
vnd
M09683_2.00 |
Drosophila melanogaster |
TCAAGTGB |
VCACTTGA |
Misc
Kulakovskiy et al.(2009)
vnd
|
0.863
|
0.930
|
Nkx2-2
M00438_2.00 |
Mus musculus |
NNNRAGDRN |
NYHCTYNNN |
PBM
Berger et al.(2008)
Nkx2-2_2823
|
0.847
|
0.930
|
Nkx2-2
M09190_2.00 |
Mus musculus |
NTBRAGWGBBN |
NVVCWCTYVAN |
Misc
Kulakovskiy et al.(2013)
NKX22_MOUSE.H11MO.0.A
|
0.847
|
0.930
|
NKX2-2
M10681_2.00 |
Homo sapiens |
WTAAGTRBTT |
AAVYACTTAW |
Transfac
Matys et al.(2006)
V$NKX22_01
|
0.847
|
0.930
|
NKX2-2
M10682_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$NKX2B_Q3_01
|
0.847
|
0.930
|
NKX2-2
M10683_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$NKX2B_Q3
|
0.847
|
0.930
|
Nkx2-9
M00520_2.00 |
Mus musculus |
NNNRAGDRBN |
NVYHCTYNNN |
PBM
Berger et al.(2008)
Nkx2-9_3082
|
0.841
|
0.877
|
Nkx2-9
M00800_2.00 |
Mus musculus |
NNRAGDRBNN |
NNVYHCTYNN |
PBM
Weirauch et al.(2013)
pTH2842
|
0.841
|
0.877
|
Nkx2-9
M09215_2.00 |
Mus musculus |
BTCAAGKRB |
VYMCTTGAV |
Misc
Kulakovskiy et al.(2013)
NKX28_MOUSE.H11MO.0.C
|
0.841
|
0.877
|
ceh-22
M00376_2.00 |
Caenorhabditis elegans |
WBRAGTRBNN |
NNVYACTYVW |
PBM
Berger et al.(2006)
Ceh-22
|
0.820
|
0.825
|
NKX2-8
M00302_2.00 |
Homo sapiens |
NNRAGDRB |
VYHCTYNN |
PBM
Barrera et al.(2016)
NKX2-8_REF
|
0.809
|
0.877
|
NKX2-8
M05149_2.00 |
Homo sapiens |
BTSRAGTGBN |
NVCACTYSAV |
SELEX
Yin et al.(2017)
NKX2-8_FL_HT-SELEX
|
0.809
|
0.877
|
NKX2-8
M09145_2.00 |
Homo sapiens |
BTCAAGKRB |
VYMCTTGAV |
Misc
Kulakovskiy et al.(2013)
NKX28_HUMAN.H11MO.0.C
|
0.809
|
0.877
|
NKX2-8
M00301_2.00 |
Homo sapiens |
NNRAKDRB |
VYHMTYNN |
PBM
Barrera et al.(2016)
NKX2-8_A94T
|
0.809
|
0.877
|
NKX2-8
M05150_2.00 |
Homo sapiens |
GCARTAACGACATC |
GATGTCGTTAYTGC |
SELEX
Yin et al.(2017)
NKX2-8_FL_Methyl-HT-SELEX_1
|
0.809
|
0.877
|
NKX2-8
M05151_2.00 |
Homo sapiens |
BTSAAGTGBN |
NVCACTTSAV |
SELEX
Yin et al.(2017)
NKX2-8_FL_Methyl-HT-SELEX_2
|
0.809
|
0.877
|
NKX2-8
M05152_2.00 |
Homo sapiens |
BTBAACGAB |
VTCGTTVAV |
SELEX
Yin et al.(2017)
NKX2-8_FL_Methyl-HT-SELEX_3
|
0.809
|
0.877
|
scro
M03854_2.00 |
Drosophila melanogaster |
NNBRMGTGB |
VCACKYVNN |
SELEX
Nitta et al.(2015)
scro_1
|
0.799
|
0.877
|
Nkx2-1
M00385_2.00 |
Mus musculus |
NNRAGDRN |
NYHCTYNN |
PBM
Berger et al.(2008)
Titf1_1722
|
0.783
|
0.860
|
Nkx2-4
M00514_2.00 |
Mus musculus |
NNRAGDRBNN |
NNVYHCTYNN |
PBM
Berger et al.(2008)
Nkx2-4_3074
|
0.783
|
0.860
|
NKX2-1
M09146_2.00 |
Homo sapiens |
BTKGAGWGBN |
NVCWCTCMAV |
Misc
Kulakovskiy et al.(2013)
NKX21_HUMAN.H11MO.0.A
|
0.783
|
0.860
|
Nkx2-1
M09171_2.00 |
Mus musculus |
NBTKGAGWGB |
VCWCTCMAVN |
Misc
Kulakovskiy et al.(2013)
NKX21_MOUSE.H11MO.0.A
|
0.783
|
0.860
|
Nkx2-1
M09563_2.00 |
Mus musculus |
BTBRAGWGBH |
DVCWCTYVAV |
Misc
Heinz et al.(2010)
LungAC-Nkx2.1_GSE43252
|
0.783
|
0.860
|
NKX2-1
M10694_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$TITF1_Q3
|
0.783
|
0.860
|
NKX2-1
M10695_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$TTF1_Q5_01
|
0.783
|
0.860
|
NKX2-1
M10696_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$TTF1_Q5
|
0.783
|
0.860
|
NKX2-1
M10697_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$TTF1_Q6
|
0.783
|
0.860
|
ceh-24
M02181_2.00 |
Caenorhabditis elegans |
NNRAKWRNN |
NNYWMTYNN |
PBM
Weirauch et al.(2014)
pTH6327
|
0.781
|
0.772
|
Nkx2-3
M00497_2.00 |
Mus musculus |
NNRAGDRNN |
NNYHCTYNN |
PBM
Berger et al.(2008)
Nkx2-3_3435
|
0.742
|
0.807
|
NKX2-3
M05042_2.00 |
Homo sapiens |
NNBAAGTGBN |
NVCACTTVNN |
SELEX
Yin et al.(2017)
NKX2-3_eDBD_HT-SELEX
|
0.742
|
0.807
|
NKX2-3
M05045_2.00 |
Homo sapiens |
BNBAAGTGBN |
NVCACTTVNV |
SELEX
Yin et al.(2017)
NKX2-3_FL_HT-SELEX
|
0.742
|
0.807
|
NKX2-3
M05043_2.00 |
Homo sapiens |
BNBAAGTGBN |
NVCACTTVNV |
SELEX
Yin et al.(2017)
NKX2-3_eDBD_Methyl-HT-SELEX_1
|
0.742
|
0.807
|
NKX2-3
M05044_2.00 |
Homo sapiens |
SDYAACGHB |
VDCGTTRHS |
SELEX
Yin et al.(2017)
NKX2-3_eDBD_Methyl-HT-SELEX_2
|
0.742
|
0.807
|
NKX2-3
M05046_2.00 |
Homo sapiens |
BNBAAGTGBN |
NVCACTTVNV |
SELEX
Yin et al.(2017)
NKX2-3_FL_Methyl-HT-SELEX_1
|
0.742
|
0.807
|
NKX2-3
M05047_2.00 |
Homo sapiens |
SWYAACSHB |
VDSGTTRWS |
SELEX
Yin et al.(2017)
NKX2-3_FL_Methyl-HT-SELEX_2
|
0.742
|
0.807
|
NKX2-5
M00323_2.00 |
Homo sapiens |
NWYAAGTGSNN |
NNSCACTTRWN |
PBM
Barrera et al.(2016)
NKX2-5_REF
|
0.741
|
0.754
|
Nkx2-5
M00404_2.00 |
Mus musculus |
NNNRAGDRBN |
NVYHCTYNNN |
PBM
Berger et al.(2008)
Nkx2-5_3436
|
0.741
|
0.754
|
NKX2-5
M05346_2.00 |
Homo sapiens |
BHYAAGTGBN |
NVCACTTRDV |
SELEX
Yin et al.(2017)
NKX2-5_FL_HT-SELEX
|
0.741
|
0.754
|
Nkx2-5
M02686_2.00 |
Mus musculus |
WTAAKWK |
MWMTTAW |
SELEX
Mathelier et al.(2014)
MA0063.1
|
0.741
|
0.754
|
Nkx2-5
M08136_2.00 |
Mus musculus |
SYTGAGWGSYH |
DRSCWCTCARS |
ChIP-seq
Mathelier et al.(2014)
MA0503.1
|
0.741
|
0.754
|
NKX2-5
M09163_2.00 |
Homo sapiens |
BKRAGWGV |
BCWCTYMV |
Misc
Kulakovskiy et al.(2013)
NKX25_HUMAN.H11MO.0.B
|
0.741
|
0.754
|
Nkx2-5
M09177_2.00 |
Mus musculus |
NBYBRAGTGS |
SCACTYVRVN |
Misc
Kulakovskiy et al.(2013)
NKX25_MOUSE.H11MO.0.A
|
0.741
|
0.754
|
Nkx2-5
M09567_2.00 |
Mus musculus |
HBRAGWGBNN |
NNVCWCTYVD |
Misc
Heinz et al.(2010)
HL1-Nkx2.5.biotin_GSE21529
|
0.741
|
0.754
|
NKX2-5
M10742_2.00 |
Homo sapiens |
TYAAGTG |
CACTTRA |
Transfac
Matys et al.(2006)
V$NKX25_01
|
0.741
|
0.754
|
NKX2-5
M10743_2.00 |
Homo sapiens |
CWTAATTV |
BAATTAWG |
Transfac
Matys et al.(2006)
V$NKX25_02
|
0.741
|
0.754
|
NKX2-5
M10744_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$NKX25_Q5
|
0.741
|
0.754
|
NKX2-5
M10745_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$NKX25_Q6
|
0.741
|
0.754
|
NKX2-5
M05347_2.00 |
Homo sapiens |
BTYAAGTGGN |
NCCACTTRAV |
SELEX
Yin et al.(2017)
NKX2-5_FL_Methyl-HT-SELEX_1
|
0.741
|
0.754
|
NKX2-5
M05348_2.00 |
Homo sapiens |
BTYAACGAB |
VTCGTTRAV |
SELEX
Yin et al.(2017)
NKX2-5_FL_Methyl-HT-SELEX_2
|
0.741
|
0.754
|
NKX2-5
M00322_2.00 |
Homo sapiens |
NNNRNNN |
NNNYNNN |
PBM
Barrera et al.(2016)
NKX2-5_R190C
|
0.741
|
0.737
|
NKX2-5
M00324_2.00 |
Homo sapiens |
NHNNNNN |
NNNNNDN |
PBM
Barrera et al.(2016)
NKX2-5_T178M
|
0.741
|
0.737
|
ceh-28
M08210_2.00 |
Caenorhabditis elegans |
AATCGATW |
WATCGATT |
ChIP-seq
Contrino et al.(2012)
Mw138
|
0.736
|
0.649
|
NKX2-5
M00321_2.00 |
Homo sapiens |
HNAAGTRBNN |
NNVYACTTND |
PBM
Barrera et al.(2016)
NKX2-5_R161P
|
0.736
|
0.737
|
Nkx2-6
M00496_2.00 |
Mus musculus |
HYAAGTRBNN |
NNVYACTTRD |
PBM
Berger et al.(2008)
Nkx2-6_3437
|
0.718
|
0.737
|
tin
M00559_2.00 |
Drosophila melanogaster |
NWYAAGTGGNN |
NNCCACTTRWN |
PBM
Busser et al.(2012a)
Tin
|
0.718
|
0.614
|
tin
M03809_2.00 |
Drosophila melanogaster |
BTYAAGTGSN |
NSCACTTRAV |
SELEX
Nitta et al.(2015)
tin_1
|
0.718
|
0.614
|
tin
M06284_2.00 |
Drosophila melanogaster |
BTYAAGTG |
CACTTRAV |
B1H
Zhu et al.(2011)
Tin_Cell_FBgn0004110
|
0.718
|
0.614
|
tin
M06285_2.00 |
Drosophila melanogaster |
BCTCAAGTGSVN |
NBSCACTTGAGV |
B1H
Zhu et al.(2011)
tin_FlyReg_FBgn0004110
|
0.718
|
0.614
|
tin
M06286_2.00 |
Drosophila melanogaster |
BWYAAGTR |
YACTTRWV |
B1H
Zhu et al.(2011)
Tin_SOLEXA_FBgn0004110
|
0.718
|
0.614
|
tin
M08421_2.00 |
Drosophila melanogaster |
DBTCRAGTGS |
SCACTYGAVH |
ChIP-chip
Mathelier et al.(2014)
MA0247.2
|
0.718
|
0.614
|
NKX2-5
M00320_2.00 |
Homo sapiens |
NHBAAKWRN |
NYWMTTVDN |
PBM
Barrera et al.(2016)
NKX2-5_K183E
|
0.707
|
0.737
|
Q24782_9CNID
M02206_2.00 |
Eleutheria dichotoma |
TTAATTAA |
TTAATTAA |
PBM
Weirauch et al.(2014)
pTH5486
|
0.613
|
0.491
|
For this family, TFs with SR scores > 0.599 will likely have a similar motif |