CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BGLB003458
(
Biomphalaria glabrata
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
BGLB003458
T232406_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
al
M03776_2.00
Drosophila melanogaster
TAAYBNVRTTA
TAAYBNVRTTA
SELEX
Nitta et al.(2015)
al_1
0.606
0.833
al
M06477_2.00
Drosophila melanogaster
TAATTAA
TTAATTA
B1H
Mathelier et al.(2014)
MA0208.1
0.606
0.833
al
M06212_2.00
Drosophila melanogaster
TAATTAA
TTAATTA
B1H
Zhu et al.(2011)
Al_Cell_FBgn0000061
0.606
0.833
al
M06213_2.00
Drosophila melanogaster
NNYTAATTR
YAATTARNN
B1H
Zhu et al.(2011)
Al_SOLEXA_FBgn0000061
0.606
0.833
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGLB003458-PA
Homeodomain
225
272
RRYRTTFNSSQLEELERAFQRTHYPDVFFREELALKIGLTEARVQLFQ
Links
Other
Homeodomain
family TFs
Other
Biomphalaria glabrata
TFs
159 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy