CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ASIM_0001224701
(
Anisakis simplex
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
ASIM_0001224701
T233091_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q86SD7_PODCA
M02213_2.00
Podocoryne carnea
NNTAATTADN
NHTAATTANN
PBM
Weirauch et al.(2014)
pTH6136
0.642
0.456
Nkx3-1
M00170_2.00
Mus musculus
NDAAGTRBNN
NNVYACTTHN
PBM
Badis et al.(2009)
Nkx3-1_2923
0.619
0.561
Nkx3-1
M00420_2.00
Mus musculus
NNAAGTRBNN
NNVYACTTNN
PBM
Berger et al.(2008)
Nkx3-1_2923
0.619
0.561
NKX3-1
M05255_2.00
Homo sapiens
NNTAAGTGSN
NSCACTTANN
SELEX
Yin et al.(2017)
NKX3-1_eDBD_HT-SELEX
0.619
0.561
NKX3-1
M09154_2.00
Homo sapiens
NYDAAGTGBYWD
HWRVCACTTHRN
Misc
Kulakovskiy et al.(2013)
NKX31_HUMAN.H11MO.0.C
0.619
0.561
Nkx3-1
M09184_2.00
Mus musculus
NYDAAGTGBYWD
HWRVCACTTHRN
Misc
Kulakovskiy et al.(2013)
NKX31_MOUSE.H11MO.0.C
0.619
0.561
NKX3-1
M09559_2.00
Homo sapiens
BTRAGTRBYY
RRVYACTYAV
Misc
Heinz et al.(2010)
LNCaP-Nkx3.1_GSE28264
0.619
0.561
NKX3-1
M10729_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GT1_Q6_01
0.619
0.561
NKX3-1
M10730_2.00
Homo sapiens
NWWTAAGTATWH
DWATACTTAWWN
Transfac
Matys et al.(2006)
V$NKX3A_01
0.619
0.561
NKX3-1
M10731_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NKX3A_Q3
0.619
0.561
NKX3-1
M05256_2.00
Homo sapiens
NNTAAGTGBN
NVCACTTANN
SELEX
Yin et al.(2017)
NKX3-1_eDBD_Methyl-HT-SELEX_1
0.619
0.561
NKX3-1
M05257_2.00
Homo sapiens
NTAAYSWB
VWSRTTAN
SELEX
Yin et al.(2017)
NKX3-1_eDBD_Methyl-HT-SELEX_2
0.619
0.561
Q0N4H7_NEMVE
M02164_2.00
Nematostella vectensis
NNDAYNDNNN
NNNHNRTHNN
PBM
Weirauch et al.(2014)
pTH6472
0.618
0.491
ENSCING00000007395
M02076_2.00
Ciona intestinalis
NNNDWNWR
YWNWHNNN
PBM
Weirauch et al.(2014)
pTH5922
0.617
0.491
Nkx3-2
M00506_2.00
Mus musculus
NNRAGDRNN
NNYHCTYNN
PBM
Berger et al.(2008)
Bapx1_2343
0.614
0.561
NKX3-2
M05012_2.00
Homo sapiens
NNTAAGTGSN
NSCACTTANN
SELEX
Yin et al.(2017)
NKX3-2_eDBD_HT-SELEX
0.614
0.561
NKX3-2
M09138_2.00
Homo sapiens
TTAAGTGBNH
DNVCACTTAA
Misc
Kulakovskiy et al.(2013)
NKX32_HUMAN.H11MO.0.C
0.614
0.561
Nkx3-2
M09212_2.00
Mus musculus
TTAAGTGBNH
DNVCACTTAA
Misc
Kulakovskiy et al.(2013)
NKX32_MOUSE.H11MO.0.B
0.614
0.561
NKX3-2
M10663_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NKX32_01
0.614
0.561
NKX3-2
M05013_2.00
Homo sapiens
NNTAAGTGBN
NVCACTTANN
SELEX
Yin et al.(2017)
NKX3-2_eDBD_Methyl-HT-SELEX_1
0.614
0.561
NKX3-2
M05014_2.00
Homo sapiens
NTAACGHB
VDCGTTAN
SELEX
Yin et al.(2017)
NKX3-2_eDBD_Methyl-HT-SELEX_2
0.614
0.561
NEMVEDRAFT_v1g114268
M02145_2.00
Nematostella vectensis
WTAATBGRT
AYCVATTAW
PBM
Weirauch et al.(2014)
pTH6514
0.612
0.491
bap
M00560_2.00
Drosophila melanogaster
NDAAGTRBNN
NNVYACTTHN
PBM
Busser et al.(2012a)
Bap
0.610
0.544
bap
M02119_2.00
Drosophila melanogaster
NYTAAGTRSNN
NNSYACTTARN
PBM
Weirauch et al.(2014)
pTH5945
0.610
0.544
bap
M03812_2.00
Drosophila melanogaster
NNTAAGTGBN
NVCACTTANN
SELEX
Nitta et al.(2015)
bap_1
0.610
0.544
bap
M06504_2.00
Drosophila melanogaster
TTAAGTR
YACTTAA
B1H
Mathelier et al.(2014)
MA0211.1
0.610
0.544
bap
M06287_2.00
Drosophila melanogaster
NBTTAAGTRN
NYACTTAAVN
B1H
Zhu et al.(2011)
Bap_Cell_FBgn0004862
0.610
0.544
bap
M06288_2.00
Drosophila melanogaster
NYTAAKTR
YAMTTARN
B1H
Zhu et al.(2011)
Bap_SOLEXA_FBgn0004862
0.610
0.544
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ASIM_0001224701-mRNA-1
Homeodomain
41
106
KRRRSSFSAEQVCRLEVEFQRQRYLSADTRNRLALALGLSQQQVVFGLAQHRVKIWFQNRRYKSKL
Links
Other
Homeodomain
family TFs
Other
Anisakis simplex
TFs
265 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy