GPLIN_000810200 (Globodera pallida)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 GPLIN_000810200 T234043_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PBX4
M00276_2.00 		Homo sapiens
NYTAATTADNN
NNHTAATTARN		 PBM
Barrera et al.(2016)
PBX4_R215Q 		0.662 0.561
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GPLIN_000810200 Homeodomain 189 248

Links

Other Homeodomain family TFs
Other Globodera pallida TFs

9 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MhA1_Contig1759.frz3.gene3 Meloidogyne hapla MhA1_Contig1759.frz3.gene3 I 0.746
Minc11665 Meloidogyne incognita Minc11665 I 0.730
Minc15321 Meloidogyne incognita Minc15321 I 0.730
PBX4 Sus scrofa ENSSSCG00000013933 I 0.683
PBX4 Microcebus murinus ENSMICG00000005939 I 0.683
ENSOARG00000007632 Ovis aries ENSOARG00000007632 I 0.671
ENSP00000251203-D1 Bos grunniens ENSP00000251203-D1 I 0.671
PBX4 Bos taurus ENSBTAG00000009975 I 0.671
ML04768a Mnemiopsis leidyi ML04768a I 0.650