HmN_000078200 (Hymenolepis microstoma)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 HmN_000078200 T234286_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Isl2
M00458_2.00
Mus musculus
NWDWDNN

NNHWHWN
PBM
Berger et al.(2008)
Isl2_3430
0.867 0.982
ISL2
M03177_2.00
Homo sapiens
YTAAKTGB

VCAMTTAR
SELEX
Jolma et al.(2013)
ISL2_1
0.867 0.982
ISL1
M04908_2.00
Homo sapiens
BTAAKTGS

SCAMTTAV
SELEX
Yin et al.(2017)
ISL1_eDBD_HT-SELEX
0.867 0.982
ISL1
M04910_2.00
Homo sapiens
NTAAKTGS

SCAMTTAN
SELEX
Yin et al.(2017)
ISL1_FL_HT-SELEX
0.867 0.982
ISL2
M05204_2.00
Homo sapiens
NTAAKTGS

SCAMTTAN
SELEX
Yin et al.(2017)
ISL2_eDBD_HT-SELEX
0.867 0.982
ISL1
M09128_2.00
Homo sapiens
NYWRAKKGV

BCMMTYWRN
Misc
Kulakovskiy et al.(2013)
ISL1_HUMAN.H11MO.0.A
0.867 0.982
Isl1
M09209_2.00
Mus musculus
NYWRAKKGV

BCMMTYWRN
Misc
Kulakovskiy et al.(2013)
ISL1_MOUSE.H11MO.0.A
0.867 0.982
Isl1
M09578_2.00
Mus musculus
YTAAKKGV

BCMMTTAR
Misc
Heinz et al.(2010)
Neuron-Isl1_GSE31456
0.867 0.982
ISL1
M10634_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ISL1_Q3
0.867 0.982
ISL1
M10635_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ISL1_Q6
0.867 0.982
ISL1
M04909_2.00
Homo sapiens
BTAAKTGS

SCAMTTAV
SELEX
Yin et al.(2017)
ISL1_eDBD_Methyl-HT-SELEX
0.867 0.982
ISL1
M04911_2.00
Homo sapiens
BTAAKTGS

SCAMTTAV
SELEX
Yin et al.(2017)
ISL1_FL_Methyl-HT-SELEX
0.867 0.982
ISL2
M05205_2.00
Homo sapiens
NTAAKTGN

NCAMTTAN
SELEX
Yin et al.(2017)
ISL2_eDBD_Methyl-HT-SELEX
0.867 0.982
ISL2B_ONCTS
M10798_2.00
Oncorhynchus tshawytscha Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ISL2_02
0.866 0.965
ISL2B_ONCTS
M10799_2.00
Oncorhynchus tshawytscha Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ISL2_03
0.866 0.965
ISL2B_ONCTS
M10800_2.00
Oncorhynchus tshawytscha Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ISL2_04
0.866 0.965
ISL2B_ONCTS
M10801_2.00
Oncorhynchus tshawytscha Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ISL2_05
0.866 0.965
tup
M06498_2.00
Drosophila melanogaster
WTAATKG

CMATTAW
B1H
Mathelier et al.(2014)
MA0248.1
0.864 0.947
tup
M06270_2.00
Drosophila melanogaster
SWTAATKG

CMATTAWS
B1H
Zhu et al.(2011)
Tup_Cell_FBgn0003896
0.864 0.947
tup
M06271_2.00
Drosophila melanogaster
NYTAATKRV

BYMATTARN
B1H
Zhu et al.(2011)
tup_SOLEXA_10_FBgn0003896
0.864 0.947
tup
M06272_2.00
Drosophila melanogaster
YTAATKR

YMATTAR
B1H
Zhu et al.(2011)
Tup_SOLEXA_FBgn0003896
0.864 0.947
CBG04010
M01242_2.00
Caenorhabditis briggsae
NNKTAATDDMN

NKHHATTAMNN
PBM
Lambert et al.(2019)
pTH11489
0.835 0.772
NEMVEDRAFT_v1g81309
M02152_2.00
Nematostella vectensis
NTAATDNNN

NNNHATTAN
PBM
Weirauch et al.(2014)
pTH5477
0.636 0.351
NOTO
M03241_2.00
Homo sapiens
NNTAATKWRN

NYWMATTANN
SELEX
Jolma et al.(2013)
NOTO_1
0.631 0.368
NOTO
M05390_2.00
Homo sapiens
BTAATKRV

BYMATTAV
SELEX
Yin et al.(2017)
NOTO_eDBD_HT-SELEX
0.631 0.368
NOTO
M05391_2.00
Homo sapiens
BTMATKRV

BYMATKAV
SELEX
Yin et al.(2017)
NOTO_eDBD_Methyl-HT-SELEX
0.631 0.368
PHOX2B
M00278_2.00
Homo sapiens
NNNNNRY

RYNNNNN
PBM
Barrera et al.(2016)
PHOX2B_Q143R
0.623 0.368
Noto
M02101_2.00
Mus musculus
NNHHATDDNN

NNHHATDDNN
PBM
Weirauch et al.(2014)
pTH6268
0.613 0.351
VSX1
M00269_2.00
Homo sapiens
NNWAAYNNN

NNNRTTWNN
PBM
Barrera et al.(2016)
VSX1_REF
0.608 0.386
Vsx1
M00459_2.00
Mus musculus
NNTAATDDN

NHHATTANN
PBM
Berger et al.(2008)
Vsx1_1728
0.608 0.386
Vsx1
M03267_2.00
Mus musculus
NTAATTRN

NYAATTAN
SELEX
Jolma et al.(2013)
Vsx1_1
0.608 0.386
VSX1
M00266_2.00
Homo sapiens
NNTAAYNNN

NNNRTTANN
PBM
Barrera et al.(2016)
VSX1_G160D
0.608 0.386
Sebox
M02097_2.00
Mus musculus
NHTTAATTAN

NTAATTAADN
PBM
Weirauch et al.(2014)
pTH6379
0.605 0.421
ceh-5
M02179_2.00
Caenorhabditis elegans
NNTAATDDN

NHHATTANN
PBM
Weirauch et al.(2014)
pTH6562
0.604 0.368
SHOX
M02095_2.00
Homo sapiens
NTAATTRN

NYAATTAN
PBM
Weirauch et al.(2014)
pTH5805
0.601 0.404
Shox2
M00439_2.00
Mus musculus
NTAATDDN

NHHATTAN
PBM
Berger et al.(2008)
Shox2_2641
0.601 0.404
SHOX
M03232_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Jolma et al.(2013)
SHOX_1
0.601 0.404
SHOX2
M03204_2.00
Homo sapiens
BTAATTRN

NYAATTAV
SELEX
Jolma et al.(2013)
SHOX2_1
0.601 0.404
Shox2
M03263_2.00
Mus musculus
NTAATTRN

NYAATTAN
SELEX
Jolma et al.(2013)
Shox2_1
0.601 0.404
CG5369
M03876_2.00
Drosophila melanogaster
TAATTHVATTA

TAATBDAATTA
SELEX
Nitta et al.(2015)
CG5369_1
0.601 0.404
CG5369
M03877_2.00
Drosophila melanogaster
TAATTRNNTAATBN

NVATTANNYAATTA
SELEX
Nitta et al.(2015)
CG5369_2
0.601 0.404
CG5369
M03878_2.00
Drosophila melanogaster
TAATTVRATWA

TWATYBAATTA
SELEX
Nitta et al.(2015)
CG5369_3
0.601 0.404
SHOX
M05366_2.00
Homo sapiens
NTAATTRV

BYAATTAN
SELEX
Yin et al.(2017)
SHOX_eDBD_HT-SELEX
0.601 0.404
Shox2
M10772_2.00
Rattus norvegicus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SHOX2_05
0.601 0.404
SHOX
M05367_2.00
Homo sapiens
NTAATTRV

BYAATTAN
SELEX
Yin et al.(2017)
SHOX_eDBD_Methyl-HT-SELEX_1
0.601 0.404
SHOX
M05368_2.00
Homo sapiens
NTAAYGAN

NTCRTTAN
SELEX
Yin et al.(2017)
SHOX_eDBD_Methyl-HT-SELEX_2
0.601 0.404
C4B866_NEMVE
M02052_2.00
Nematostella vectensis
NNTTAATTARNN

NNYTAATTAANN
PBM
Weirauch et al.(2014)
pTH6176
0.600 0.421
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HmN_000078200 Homeodomain 355 411

Links

Other Homeodomain family TFs
Other Hymenolepis microstoma TFs

604 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
67303 Aureococcus anophagefferens 67303 N 0.000
AAEL000771 Aedes aegypti AAEL000771 N 0.000
AALB009772 Anopheles albimanus AALB009772 N 0.000
AALB009867 Anopheles albimanus AALB009867 N 0.000
AARA000825 Anopheles arabiensis AARA000825 N 0.000
AATE015714 Anopheles atroparvus AATE015714 N 0.000
AATE016483 Anopheles atroparvus AATE016483 N 0.000
ACEP10857 Atta cephalotes ACEP10857 N 0.000
ACEP25851 Atta cephalotes ACEP25851 N 0.000
ACOM022799 Anopheles coluzzii ACOM022799 N 0.000
ACOM026653 Anopheles coluzzii ACOM026653 N 0.000
ACUA008827 Anopheles culicifacies ACUA008827 N 0.000
ACUA010594 Anopheles culicifacies ACUA010594 N 0.000
ACUA012732 Anopheles culicifacies ACUA012732 N 0.000
ADIR005631 Anopheles dirus ADIR005631 N 0.000
ADIR009661 Anopheles dirus ADIR009661 N 0.000
AEPI003629 Anopheles epiroticus AEPI003629 N 0.000
AEPI007652 Anopheles epiroticus AEPI007652 N 0.000
AEPI007948 Anopheles epiroticus AEPI007948 N 0.000
Afo_R012388 Aptenodytes forsteri Afo_R012388 N 0.000
Afo_R012670 Aptenodytes forsteri Afo_R012670 N 0.000
AFUN006689 Anopheles funestus AFUN006689 N 0.000
AFUN009317 Anopheles funestus AFUN009317 N 0.000
AFUN010198 Anopheles funestus AFUN010198 N 0.000
AGAP028091 Anopheles gambiae AGAP028091 N 0.000
ALUE_0000245701 Ascaris lumbricoides ALUE_0000245701 N 0.000
ALUE_0000639901 Ascaris lumbricoides ALUE_0000639901 N 0.000
AMAM004028 Anopheles maculatus AMAM004028 N 0.000
AMAM023617 Anopheles maculatus AMAM023617 N 0.000
AMEC007393 Anopheles melas AMEC007393 N 0.000
AMEC011653 Anopheles melas AMEC011653 N 0.000
AMEM002834 Anopheles merus AMEM002834 N 0.000
AMEM007694 Anopheles merus AMEM007694 N 0.000
AMIN001220 Anopheles minimus AMIN001220 N 0.000
AMIN009302 Anopheles minimus AMIN009302 N 0.000
ANCCEY_05358 Ancylostoma ceylanicum ANCCEY_05358 N 0.000
ANCDUO_13942 Ancylostoma duodenale ANCDUO_13942 N 0.000
AQUA001261 Anopheles quadriannulatus AQUA001261 N 0.000
AQUA005880 Anopheles quadriannulatus AQUA005880 N 0.000
ASIS001889 Anopheles sinensis ASIS001889 N 0.000
ASTEI06131 Anopheles stephensi ASTEI06131 N 0.000
ASTEI06408 Anopheles stephensi ASTEI06408 N 0.000
BGIBMGA003081 Bombyx mori BGIBMGA003081 N 0.000
BGLB010902 Biomphalaria glabrata BGLB010902 N 0.000
Brh_R004116 Buceros rhinoceros Brh_R004116 N 0.000
Cla016375 Citrullus lanatus Cla016375 N 0.000
CLEC006960 Cimex lectularius CLEC006960 N 0.000
CMQ_5875 Grosmannia clavigera CMQ_5875 N 0.000
Cmyd_10006594 Chelonia mydas Cmyd_10006594 N 0.000
CNM02020 Cryptococcus neoformans CNM02020 N 0.000
CPIJ012041 Culex quinquefasciatus CPIJ012041 N 0.000
CPIJ012498 Culex quinquefasciatus CPIJ012498 N 0.000
CPIJ014017 Culex quinquefasciatus CPIJ014017 N 0.000
CpipJ_CPIJ012041 Culex pipiens CpipJ_CPIJ012041 N 0.000
CpipJ_CPIJ012498 Culex pipiens CpipJ_CPIJ012498 N 0.000
CpipJ_CPIJ014017 Culex pipiens CpipJ_CPIJ014017 N 0.000
D918_08317 Trichuris suis D918_08317 N 0.000
DAPPUDRAFT_113704 Daphnia pulex DAPPUDRAFT_113704 N 0.000
DDB_G0287073 Dictyostelium discoideum DDB_G0287073 N 0.000
ECPE_0001383301 Echinostoma caproni ECPE_0001383301 N 0.000
EFA85451.1 Polysphondylium pallidum EFA85451.1 N 0.000
ENSAMXG00000017231 Astyanax mexicanus ENSAMXG00000017231 I 0.000
ENSAPLG00000003216 Anas platyrhynchos ENSAPLG00000003216 N 0.000
ENSAPLG00000010204 Anas platyrhynchos ENSAPLG00000010204 N 0.000
ENSAPLG00000013168 Anas platyrhynchos ENSAPLG00000013168 I 0.000
ENSBTAP00000027633-D1 Bos grunniens ENSBTAP00000027633-D1 I 0.000
ENSCSAG00000016751 Chlorocebus sabaeus ENSCSAG00000016751 N 0.000
ENSFCAG00000015685 Felis catus ENSFCAG00000015685 I 0.000
ENSMGAG00000006624 Meleagris gallopavo ENSMGAG00000006624 N 0.000
ENSNLEG00000002693 Nomascus leucogenys ENSNLEG00000002693 N 0.000
ENSOANG00000002448 Ornithorhynchus anatinus ENSOANG00000002448 I 0.000
ENSOANG00000011188 Ornithorhynchus anatinus ENSOANG00000011188 I 0.000
ENSP00000409273 Macaca fascicularis ENSP00000409273 I 0.000
ENSPMAG00000004519 Petromyzon marinus ENSPMAG00000004519 N 0.000
ENSSHAG00000008406 Sarcophilus harrisii ENSSHAG00000008406 I 0.000
ENSTSYG00000001164 Tarsius syrichta ENSTSYG00000001164 I 0.000
ENSTSYG00000006321 Tarsius syrichta ENSTSYG00000006321 I 0.000
ENSTTRG00000015548 Tursiops truncatus ENSTTRG00000015548 I 0.000
estExt_fgeneshDP_kg.C_1020010 Dictyostelium purpureum estExt_fgeneshDP_kg.C_1020010 N 0.000
fgenesh1_pg.C_scaffold_11000031 Sporobolomyces roseus fgenesh1_pg.C_scaffold_11000031 N 0.000
GB40963 Apis mellifera GB40963 N 0.000
GLOINDRAFT_25375 Rhizophagus irregularis GLOINDRAFT_25375 N 0.000
GLOINDRAFT_271935 Rhizophagus irregularis GLOINDRAFT_271935 N 0.000
GLOINDRAFT_335861 Rhizophagus irregularis GLOINDRAFT_335861 N 0.000
GLOINDRAFT_346686 Rhizophagus irregularis GLOINDRAFT_346686 N 0.000
GLOINDRAFT_83691 Rhizophagus irregularis GLOINDRAFT_83691 N 0.000
GLOTRDRAFT_8101 Gloeophyllum trabeum GLOTRDRAFT_8101 N 0.000
GLYMA20G01570 Glycine max GLYMA20G01570 N 0.000
GPLIN_000530400 Globodera pallida GPLIN_000530400 N 0.000
GPLIN_000970900 Globodera pallida GPLIN_000970900 N 0.000
GPUH_0000499601 Gongylonema pulchrum GPUH_0000499601 N 0.000
Hba_21281 Heterorhabditis bacteriophora Hba_21281 N 0.000
HelroG68905 Helobdella robusta HelroG68905 N 0.000
HHAL000218-PA Halyomorpha halys HHAL000218-PA N 0.000
HHAL001293-PA Halyomorpha halys HHAL001293-PA N 0.000
HHAL001583-PA Halyomorpha halys HHAL001583-PA N 0.000
HMEL013676 Heliconius melpomene HMEL013676 N 0.000
Hmg20b Mus musculus ENSMUSG00000020232 D 0.000
HmN_000301900 Hymenolepis microstoma HmN_000301900 N 0.000
Hsal_04827--XP_001122993.1_APIME Harpegnathos saltator Hsal_04827--XP_001122993.1_APIME N 0.000
Hsal_05005--XP_001122373.1_APIME Harpegnathos saltator Hsal_05005--XP_001122373.1_APIME N 0.000
ISCW001638 Ixodes scapularis ISCW001638 N 0.000
K443DRAFT_58201 Laccaria amethystina K443DRAFT_58201 N 0.000
L798_00185 Zootermopsis nevadensis L798_00185 N 0.000
L798_05432 Zootermopsis nevadensis L798_05432 N 0.000
L798_12046 Zootermopsis nevadensis L798_12046 N 0.000
L898_g4879 Steinernema monticolum L898_g4879 N 0.000
LACBIDRAFT_169971 Laccaria bicolor LACBIDRAFT_169971 N 0.000
LCUP001586 Lucilia cuprina LCUP001586 N 0.000
LDEC007550 Leptinotarsa decemlineata LDEC007550 N 0.000
LDEC017494 Leptinotarsa decemlineata LDEC017494 N 0.000
LDEC018263 Leptinotarsa decemlineata LDEC018263 N 0.000
LDEC019307 Leptinotarsa decemlineata LDEC019307 N 0.000
LotgiG143673 Lottia gigantea LotgiG143673 N 0.000
M404DRAFT_787968 Pisolithus tinctorius M404DRAFT_787968 N 0.000
M422DRAFT_54734 Sphaerobolus stellatus M422DRAFT_54734 N 0.000
MESCA006364 Megaselia scalaris MESCA006364 N 0.000
MESCA012239 Megaselia scalaris MESCA012239 I 0.000
Minc18937 Meloidogyne incognita Minc18937 N 0.000
MPER_06248 Moniliophthora perniciosa MPER_06248 N 0.000
Myotis_brandtii_Hmgb2_10029741 Myotis brandtii Myotis_brandtii_Hmgb2_10029741 N 0.000
Myotis_brandtii_TIMM8A_10019481 Myotis brandtii Myotis_brandtii_TIMM8A_10019481 N 0.000
OESDEN_19415 Oesophagostomum dentatum OESDEN_19415 N 0.000
Ogr00751 Ophisaurus gracilis Ogr00751 I 0.000
Ogr08337 Ophisaurus gracilis Ogr08337 N 0.000
Ogr11176 Ophisaurus gracilis Ogr11176 N 0.000
Ogr13852 Ophisaurus gracilis Ogr13852 N 0.000
PEQ_0000549401 Parascaris equorum PEQ_0000549401 N 0.000
PHUM433280 Pediculus humanus PHUM433280 N 0.000
PLEOSDRAFT_1017219 Pleurotus ostreatus PLEOSDRAFT_1017219 N 0.000
POSPLDRAFT_103238 Postia placenta POSPLDRAFT_103238 N 0.000
PPA11045 Pristionchus pacificus PPA11045 N 0.000
PPAI003639 Phlebotomus papatasi PPAI003639 N 0.000
PPAI005428 Phlebotomus papatasi PPAI005428 N 0.000
PredSwiss_ASS2010_3779.1 Pneumocystis carinii PredSwiss_ASS2010_3779.1 N 0.000
PredSwiss_CON1835.1 Pneumocystis carinii PredSwiss_CON1835.1 N 0.000
PXEA_0002992801 Protopolystoma xenopodis PXEA_0002992801 N 0.000
RPRC001038 Rhodnius prolixus RPRC001038 N 0.000
RPRC013413 Rhodnius prolixus RPRC013413 N 0.000
SapurV1A.0237s0190 Salix purpurea SapurV1A.0237s0190 N 0.000
SCLCIDRAFT_59496 Scleroderma citrinum SCLCIDRAFT_59496 N 0.000
SINV16572 Solenopsis invicta SINV16572 N 0.000
SINV19749 Solenopsis invicta SINV19749 N 0.000
SINV24165 Solenopsis invicta SINV24165 N 0.000
Sjc_0107520 Schistosoma japonicum Sjc_0107520 N 0.000
SMAR007058 Strigamia maritima SMAR007058 N 0.000
SMAR010125 Strigamia maritima SMAR010125 N 0.000
SMU15030186 Schmidtea mediterranea SMU15030186 N 0.000
sox-2 Caenorhabditis elegans WBGene00004949 I 0.000
SOX10 Echinops telfairi ENSETEG00000012633 I 0.000
SOX12 Dasypus novemcinctus ENSDNOG00000044763 N 0.000
SOX17 Sorex araneus ENSSARG00000009573 I 0.000
Sox17 Mus musculus ENSMUSG00000025902 D 0.000
SOX18 Pan troglodytes ENSPTRG00000030459 I 0.000
SOX18 Dasypus novemcinctus ENSDNOG00000036237 N 0.000
SOX18 Procavia capensis ENSPCAG00000015663 N 0.000
SOX18 Callithrix jacchus ENSCJAG00000022379 N 0.000
SOX2 Procavia capensis ENSPCAG00000003690 I 0.000
SOX2 Felis catus ENSFCAG00000029205 I 0.000
SOX8 Microcebus murinus ENSMICG00000011516 I 0.000
SOX8 Callithrix jacchus ENSCJAG00000002684 I 0.000
SOX8 Felis catus ENSFCAG00000004219 N 0.000
SOX8 Echinops telfairi ENSETEG00000015470 N 0.000
SOX9 Myotis lucifugus ENSMLUG00000030312 I 0.000
SOX9 Echinops telfairi ENSETEG00000020237 I 0.000
SOX9 Tupaia belangeri ENSTBEG00000000175 N 0.000
sox9a Tetraodon nigroviridis ENSTNIG00000001901 N 0.000
SPER_0001708101 Spirometra erinaceieuropaei SPER_0001708101 N 0.000
SPER_0001952401 Spirometra erinaceieuropaei SPER_0001952401 N 0.000
TC009856 Tribolium castaneum TC009856 N 0.000
TCNE_0000669501 Toxocara canis TCNE_0000669501 N 0.000
TVAG_114290 Trichomonas vaginalis TVAG_114290 N 0.000
TVAG_390840 Trichomonas vaginalis TVAG_390840 N 0.000
UCREL1_237 Eutypa lata UCREL1_237 N 0.000
UCREL1_749 Eutypa lata UCREL1_749 N 0.000
VDBG_04936 Verticillium albo atrum VDBG_04936 N 0.000
VDBG_04936 Verticillium alfalfae VDBG_04936 N 0.000
WALSEDRAFT_59420 Wallemia sebi WALSEDRAFT_59420 N 0.000
yakG000714 Bos grunniens yakG000714 N 0.000
YQE_03817 Dendroctonus ponderosae YQE_03817 N 0.000
YQE_08562 Dendroctonus ponderosae YQE_08562 N 0.000