HmN_000469000 (Hymenolepis microstoma)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 HmN_000469000 T234311_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CBG08197
M02064_2.00
Caenorhabditis briggsae
NNDACDNN

NNHGTHNN
PBM
Weirauch et al.(2014)
pTH6408
0.635 0.614
ara
M06518_2.00
Drosophila melanogaster
WWACA

TGTWW
B1H
Mathelier et al.(2014)
MA0210.1
0.600 0.719
ara
M06313_2.00
Drosophila melanogaster
TGTWWWNN

NNWWWACA
B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904
0.600 0.719
ara
M06314_2.00
Drosophila melanogaster
DWWACA

TGTWWH
B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904
0.600 0.719
Irx6
M00456_2.00
Mus musculus
NNDAHWN

NWDTHNN
PBM
Berger et al.(2008)
Irx6_2623
0.600 0.702
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HmN_000469000 Homeodomain 174 233

Links

Other Homeodomain family TFs
Other Hymenolepis microstoma TFs

96 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACOM041992 Anopheles coluzzii ACOM041992 N 0.000
AMEM011894 Anopheles merus AMEM011894 N 0.000