CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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snap_masked-nMf.1.1.scaf05453-processed-gene-0.4
(
Meloidogyne floridensis
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
snap_masked-nMf.1.1.scaf05453-processed-gene-0.4
T236233_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
snap_masked-nMf.1.1.scaf05453-processed-gene-0.4-mRNA-1
Homeodomain
10
61
DLKEEQVKLFKQIYGQDQRPNTPILQQLVEATGLNIRIVRAWFQNERRKDRN
Links
Other
Homeodomain
family TFs
Other
Meloidogyne floridensis
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
M413DRAFT_413029
Hebeloma cylindrosporum
M413DRAFT_413029
N
0.637
B_00147
Schistosoma haematobium
B_00147
N
0.619
CJA20370
Caenorhabditis japonica
CJA20370
N
0.607
SSLN_0000226701
Schistocephalus solidus
SSLN_0000226701
N
0.605
nOo.2.0.1.g11854
Onchocerca ochengi
nOo.2.0.1.g11854
N
0.605
PXEA_0002744701
Protopolystoma xenopodis
PXEA_0002744701
N
0.603