CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TMUE_s0046003700
(
Trichuris muris
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
TMUE_s0046003700
T236933_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ceh-5
M02179_2.00
Caenorhabditis elegans
NNTAATDDN
NHHATTANN
PBM
Weirauch et al.(2014)
pTH6562
0.777
0.596
VAX2
M00284_2.00
Homo sapiens
NNTAATND
HNATTANN
PBM
Barrera et al.(2016)
VAX2_REF
0.738
0.579
Vax1
M00398_2.00
Mus musculus
NTAATNDNN
NNHNATTAN
PBM
Berger et al.(2008)
Vax1_3499
0.738
0.579
Vax2
M00464_2.00
Mus musculus
NTAATDDNN
NNHHATTAN
PBM
Berger et al.(2008)
Vax2_3500
0.738
0.579
VAX2
M03119_2.00
Homo sapiens
YTAATKAN
NTMATTAR
SELEX
Jolma et al.(2013)
VAX2_1
0.738
0.579
VAX2
M05030_2.00
Homo sapiens
BTAATTRV
BYAATTAV
SELEX
Yin et al.(2017)
VAX2_FL_HT-SELEX
0.738
0.579
Vax1
M10764_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$VAX1_04
0.738
0.579
VAX2
M05031_2.00
Homo sapiens
BTAATTRV
BYAATTAV
SELEX
Yin et al.(2017)
VAX2_FL_Methyl-HT-SELEX
0.738
0.579
EMX1
M02088_2.00
Homo sapiens
NNTAATKANN
NNTMATTANN
PBM
Weirauch et al.(2014)
pTH5677
0.733
0.579
EMX1
M03151_2.00
Homo sapiens
NBTAATTRNN
NNYAATTAVN
SELEX
Jolma et al.(2013)
EMX1_1
0.733
0.579
EMX1
M03152_2.00
Homo sapiens
YMATTARYTAATKR
YMATTARYTAATKR
SELEX
Jolma et al.(2013)
EMX1_2
0.733
0.579
EMX1
M05145_2.00
Homo sapiens
BTAATTAN
NTAATTAV
SELEX
Yin et al.(2017)
EMX1_eDBD_HT-SELEX
0.733
0.579
EMX1
M05147_2.00
Homo sapiens
BTAATTAV
BTAATTAV
SELEX
Yin et al.(2017)
EMX1_FL_HT-SELEX
0.733
0.579
EMX1
M05146_2.00
Homo sapiens
BTAATTRN
NYAATTAV
SELEX
Yin et al.(2017)
EMX1_eDBD_Methyl-HT-SELEX
0.733
0.579
EMX1
M05148_2.00
Homo sapiens
BTAATTAN
NTAATTAV
SELEX
Yin et al.(2017)
EMX1_FL_Methyl-HT-SELEX
0.733
0.579
VAX2
M00283_2.00
Homo sapiens
NNTAAWNDNN
NNHNWTTANN
PBM
Barrera et al.(2016)
VAX2_L139M
0.732
0.561
ems
M02114_2.00
Drosophila melanogaster
NTAATKRNB
VNYMATTAN
PBM
Weirauch et al.(2014)
pTH5673
0.717
0.561
ems
M03789_2.00
Drosophila melanogaster
BTAATTAN
NTAATTAV
SELEX
Nitta et al.(2015)
ems_1
0.717
0.561
ems
M03790_2.00
Drosophila melanogaster
BTAATTAVBVBTAATKRN
NYMATTAVBVBTAATTAV
SELEX
Nitta et al.(2015)
ems_2
0.717
0.561
ems
M03791_2.00
Drosophila melanogaster
BTAATKRN
NYMATTAV
SELEX
Nitta et al.(2015)
ems_3
0.717
0.561
ems
M03792_2.00
Drosophila melanogaster
STAATKRSSSSTAATKRV
BYMATTASSSSYMATTAS
SELEX
Nitta et al.(2015)
ems_4
0.717
0.561
ems
M06484_2.00
Drosophila melanogaster
HTAATKR
YMATTAD
B1H
Mathelier et al.(2014)
MA0219.1
0.717
0.561
ems
M06233_2.00
Drosophila melanogaster
WHTAATKR
YMATTADW
B1H
Zhu et al.(2011)
Ems_Cell_FBgn0000576
0.717
0.561
ems
M06234_2.00
Drosophila melanogaster
TSTMATHM
KDATKASA
B1H
Zhu et al.(2011)
ems_FlyReg_FBgn0000576
0.717
0.561
ems
M06235_2.00
Drosophila melanogaster
YTAATKA
TMATTAR
B1H
Zhu et al.(2011)
Ems_SOLEXA_FBgn0000576
0.717
0.561
ems
M09676_2.00
Drosophila melanogaster
WTWATGA
TCATWAW
Misc
Kulakovskiy et al.(2009)
ems
0.717
0.561
Emx2
M00495_2.00
Mus musculus
NTAATDDNN
NNHHATTAN
PBM
Berger et al.(2008)
Emx2_3420
0.717
0.579
EMX2
M03210_2.00
Homo sapiens
NBTAATTANN
NNTAATTAVN
SELEX
Jolma et al.(2013)
EMX2_1
0.717
0.579
EMX2
M03211_2.00
Homo sapiens
YMATTARBTAATKR
YMATTAVYTAATKR
SELEX
Jolma et al.(2013)
EMX2_2
0.717
0.579
EMX2
M05281_2.00
Homo sapiens
YTAATKAB
VTMATTAR
SELEX
Yin et al.(2017)
EMX2_eDBD_HT-SELEX
0.717
0.579
EMX2
M05282_2.00
Homo sapiens
YTAATKAN
NTMATTAR
SELEX
Yin et al.(2017)
EMX2_eDBD_Methyl-HT-SELEX
0.717
0.579
E5
M03814_2.00
Drosophila melanogaster
STAATKNN
NNMATTAS
SELEX
Nitta et al.(2015)
E5_1
0.712
0.561
E5
M06507_2.00
Drosophila melanogaster
BTAATKA
TMATTAV
B1H
Mathelier et al.(2014)
MA0189.1
0.712
0.561
E5
M06293_2.00
Drosophila melanogaster
NBTAATKA
TMATTAVN
B1H
Zhu et al.(2011)
E5_Cell_FBgn0008646
0.712
0.561
E5
M06294_2.00
Drosophila melanogaster
NTAATDR
YHATTAN
B1H
Zhu et al.(2011)
E5_SOLEXA_FBgn0008646
0.712
0.561
C15
M06505_2.00
Drosophila melanogaster
TTAAWKR
YMWTTAA
B1H
Mathelier et al.(2014)
MA0170.1
0.709
0.561
C15
M06289_2.00
Drosophila melanogaster
BTTAAWKR
YMWTTAAV
B1H
Zhu et al.(2011)
C15_Cell_FBgn0004863
0.709
0.561
C15
M06290_2.00
Drosophila melanogaster
NWTAAWKR
YMWTTAWN
B1H
Zhu et al.(2011)
C15_SOLEXA_FBgn0004863
0.709
0.561
TLX2
M02087_2.00
Homo sapiens
NYRDNNNNNN
NNNNNNHYRN
PBM
Weirauch et al.(2014)
pTH6482
0.706
0.561
Tlx2
M00526_2.00
Mus musculus
WTTAAWTA
TAWTTAAW
PBM
Berger et al.(2008)
Tlx2_3498
0.706
0.561
TLX2
M05020_2.00
Homo sapiens
BTAATTRN
NYAATTAV
SELEX
Yin et al.(2017)
TLX2_eDBD_HT-SELEX
0.706
0.561
TLX2
M10672_2.00
Homo sapiens
BNGTAAKDNB
VNHMTTACNV
Transfac
Matys et al.(2006)
V$NCX_01
0.706
0.561
TLX2
M05021_2.00
Homo sapiens
NTAATTRV
BYAATTAN
SELEX
Yin et al.(2017)
TLX2_eDBD_Methyl-HT-SELEX
0.706
0.561
lms
M03863_2.00
Drosophila melanogaster
BTAATTRV
BYAATTAV
SELEX
Nitta et al.(2015)
CG13424_1
0.692
0.509
lms
M03864_2.00
Drosophila melanogaster
HTWATTRDWTDATTRR
YYAATHAWHYAATWAD
SELEX
Nitta et al.(2015)
lms_1
0.692
0.509
lms
M06536_2.00
Drosophila melanogaster
YTAATKR
YMATTAR
B1H
Mathelier et al.(2014)
MA0175.1
0.692
0.509
lms
M06347_2.00
Drosophila melanogaster
NYTAATKR
YMATTARN
B1H
Zhu et al.(2011)
CG13424_Cell_FBgn0034520
0.692
0.509
lms
M06348_2.00
Drosophila melanogaster
NNHTAATDRN
NYHATTADNN
B1H
Zhu et al.(2011)
CG13424_SOLEXA_2_FBgn0034520
0.692
0.509
lms
M06349_2.00
Drosophila melanogaster
YTAATKR
YMATTAR
B1H
Zhu et al.(2011)
CG13424_SOLEXA_FBgn0034520
0.692
0.509
Nkx1-2
M00503_2.00
Mus musculus
NNTAAWNDN
NHNWTTANN
PBM
Berger et al.(2008)
Nkx1-2_3214
0.675
0.544
Nkx1-1
M00442_2.00
Mus musculus
NNTAATNDNN
NNHNATTANN
PBM
Berger et al.(2008)
Nkx1-1_3856
0.674
0.526
slou
M00557_2.00
Drosophila melanogaster
NNTAATDRN
NYHATTANN
PBM
Busser et al.(2012a)
Slou
0.674
0.526
slou
M03798_2.00
Drosophila melanogaster
VBTAATTRSB
VSYAATTAVB
SELEX
Nitta et al.(2015)
slou_1
0.674
0.526
slou
M06494_2.00
Drosophila melanogaster
YTAATKR
YMATTAR
B1H
Mathelier et al.(2014)
MA0245.1
0.674
0.526
slou
M06262_2.00
Drosophila melanogaster
BYTAATKR
YMATTARV
B1H
Zhu et al.(2011)
Slou_Cell_FBgn0002941
0.674
0.526
slou
M06263_2.00
Drosophila melanogaster
HTAATKR
YMATTAD
B1H
Zhu et al.(2011)
Slou_SOLEXA_FBgn0002941
0.674
0.526
lin-39
M08211_2.00
Caenorhabditis elegans
GATTGATG
CATCAATC
ChIP-seq
Contrino et al.(2012)
Mw154
0.671
0.509
lin-39
M09582_2.00
Caenorhabditis elegans
DTGATWRATK
MATYWATCAH
Misc
Heinz et al.(2010)
cElegans.L3-LIN39_modEncode
0.671
0.509
Hoxa4
M00383_2.00
Mus musculus
NTAATBDNN
NNHVATTAN
PBM
Berger et al.(2008)
Hoxa4_3426
0.671
0.491
HOXA4
M05381_2.00
Homo sapiens
NTAATKRY
RYMATTAN
SELEX
Yin et al.(2017)
HOXA4_eDBD_HT-SELEX
0.671
0.491
HOXA4
M10755_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXA4_Q2
0.671
0.491
HOXA4
M05382_2.00
Homo sapiens
NTAAYGAY
RTCRTTAN
SELEX
Yin et al.(2017)
HOXA4_eDBD_Methyl-HT-SELEX
0.671
0.491
HOXC4
M00330_2.00
Homo sapiens
YTAATTRB
VYAATTAR
PBM
Barrera et al.(2016)
HOXC4_REF
0.671
0.474
Hoxb4
M00479_2.00
Mus musculus
NTAATNDNN
NNHNATTAN
PBM
Berger et al.(2008)
Hoxb4_2627
0.671
0.474
Hoxc4
M00530_2.00
Mus musculus
NWAATNDNN
NNHNATTWN
PBM
Berger et al.(2008)
Hoxc4_3491
0.671
0.474
HOXB4
M05343_2.00
Homo sapiens
YTAATKAY
RTMATTAR
SELEX
Yin et al.(2017)
HOXB4_FL_HT-SELEX
0.671
0.474
HOXC4
M05385_2.00
Homo sapiens
NTAATKRN
NYMATTAN
SELEX
Yin et al.(2017)
HOXC4_FL_HT-SELEX
0.671
0.474
HOXD4
M05273_2.00
Homo sapiens
NTMATKRV
BYMATKAN
SELEX
Yin et al.(2017)
HOXD4_eDBD_HT-SELEX
0.671
0.474
HOXD4
M05276_2.00
Homo sapiens
NTAATKRB
VYMATTAN
SELEX
Yin et al.(2017)
HOXD4_FL_HT-SELEX
0.671
0.474
HOXB4
M09162_2.00
Homo sapiens
YTAATKRS
SYMATTAR
Misc
Kulakovskiy et al.(2013)
HXB4_HUMAN.H11MO.0.B
0.671
0.474
Hoxb4
M09204_2.00
Mus musculus
YTAATKRS
SYMATTAR
Misc
Kulakovskiy et al.(2013)
HXB4_MOUSE.H11MO.0.A
0.671
0.474
Hoxb4
M09576_2.00
Mus musculus
TGATDRATKRSN
NSYMATYHATCA
Misc
Heinz et al.(2010)
ES-Hoxb4_GSE34014
0.671
0.474
HOXC4
M00328_2.00
Homo sapiens
YTAATTAB
VTAATTAR
PBM
Barrera et al.(2016)
HOXC4_N178S
0.671
0.474
HOXB4
M05344_2.00
Homo sapiens
HTAAYGAY
RTCRTTAD
SELEX
Yin et al.(2017)
HOXB4_FL_Methyl-HT-SELEX_1
0.671
0.474
HOXB4
M05345_2.00
Homo sapiens
HTAAYKAB
VTMRTTAD
SELEX
Yin et al.(2017)
HOXB4_FL_Methyl-HT-SELEX_2
0.671
0.474
HOXC4
M05386_2.00
Homo sapiens
NTAATKRN
NYMATTAN
SELEX
Yin et al.(2017)
HOXC4_FL_Methyl-HT-SELEX_1
0.671
0.474
HOXC4
M05387_2.00
Homo sapiens
NTAAYGAY
RTCRTTAN
SELEX
Yin et al.(2017)
HOXC4_FL_Methyl-HT-SELEX_2
0.671
0.474
HOXD4
M05274_2.00
Homo sapiens
NTMATKRN
NYMATKAN
SELEX
Yin et al.(2017)
HOXD4_eDBD_Methyl-HT-SELEX_1
0.671
0.474
HOXD4
M05275_2.00
Homo sapiens
NTAAYGAY
RTCRTTAN
SELEX
Yin et al.(2017)
HOXD4_eDBD_Methyl-HT-SELEX_2
0.671
0.474
HOXD4
M05277_2.00
Homo sapiens
NTAATKRN
NYMATTAN
SELEX
Yin et al.(2017)
HOXD4_FL_Methyl-HT-SELEX_1
0.671
0.474
HOXD4
M05278_2.00
Homo sapiens
NTAAYGAY
RTCRTTAN
SELEX
Yin et al.(2017)
HOXD4_FL_Methyl-HT-SELEX_2
0.671
0.474
CG18599
M06539_2.00
Drosophila melanogaster
HTAATKA
TMATTAD
B1H
Mathelier et al.(2014)
MA0177.1
0.662
0.596
CG18599
M06354_2.00
Drosophila melanogaster
HTAATKA
TMATTAD
B1H
Zhu et al.(2011)
CG18599_Cell_FBgn0038592
0.662
0.596
CG18599
M06355_2.00
Drosophila melanogaster
YTAATKA
TMATTAR
B1H
Zhu et al.(2011)
CG18599_SOLEXA_FBgn0038592
0.662
0.596
NK7.1
M03847_2.00
Drosophila melanogaster
VTTAAAYGDTD
HAHCRTTTAAB
SELEX
Nitta et al.(2015)
NK7.1_1
0.660
0.491
NK7.1
M03848_2.00
Drosophila melanogaster
NSTTAATTGVY
RBCAATTAASN
SELEX
Nitta et al.(2015)
NK7.1_2
0.660
0.491
NK7.1
M06524_2.00
Drosophila melanogaster
TTAATDR
YHATTAA
B1H
Mathelier et al.(2014)
MA0196.1
0.660
0.491
NK7.1
M06323_2.00
Drosophila melanogaster
NTTAATDR
YHATTAAN
B1H
Zhu et al.(2011)
NK7.1_Cell_FBgn0024321
0.660
0.491
NK7.1
M06324_2.00
Drosophila melanogaster
YTAATDR
YHATTAR
B1H
Zhu et al.(2011)
NK7.1_SOLEXA_FBgn0024321
0.660
0.491
TLX3
M05233_2.00
Homo sapiens
NAATKGNNNNNNNNNNNNNCAATTN
NAATTGNNNNNNNNNNNNNCMATTN
SELEX
Yin et al.(2017)
TLX3_eDBD_HT-SELEX
0.660
0.544
TLX3
M05235_2.00
Homo sapiens
NAATTGNNNNNHNNNNCAATTN
NAATTGNNNNDNNNNNCAATTN
SELEX
Yin et al.(2017)
TLX3_FL_HT-SELEX
0.660
0.544
TLX3
M05234_2.00
Homo sapiens
NAATTGNNNNNNNNNNDCAATTD
HAATTGHNNNNNNNNNNCAATTN
SELEX
Yin et al.(2017)
TLX3_eDBD_Methyl-HT-SELEX
0.660
0.544
TLX3
M05236_2.00
Homo sapiens
HAATTRNNNNNNNNNYHATTV
BAATDRNNNNNNNNNYAATTD
SELEX
Yin et al.(2017)
TLX3_FL_Methyl-HT-SELEX
0.660
0.544
Q70HR3_PLEPI
M02210_2.00
Pleurobrachia pileus
NVVTACTWRD
HYWAGTABBN
PBM
Weirauch et al.(2014)
pTH6529
0.658
0.526
Hoxd3
M00531_2.00
Mus musculus
NTAATNDN
NHNATTAN
PBM
Berger et al.(2008)
Hoxd3_1742
0.653
0.509
Hoxa3
M00172_2.00
Mus musculus
NTAATKRNNN
NNNYMATTAN
PBM
Badis et al.(2009)
Hoxa3_2783
0.653
0.509
Hoxa3
M00532_2.00
Mus musculus
NTAATKRNN
NNYMATTAN
PBM
Berger et al.(2008)
Hoxa3_2783
0.653
0.509
Hoxd3
M03287_2.00
Mus musculus
NNTAATKRNN
NNYMATTANN
SELEX
Jolma et al.(2013)
Hoxd3_1
0.653
0.509
HOXD3
M05101_2.00
Homo sapiens
CTAATTAS
STAATTAG
SELEX
Yin et al.(2017)
HOXD3_FL_HT-SELEX
0.653
0.509
HOXA3
M10651_2.00
Homo sapiens
SVTWNDDKB
VMHHNWABS
Transfac
Matys et al.(2006)
V$HOXA3_01
0.653
0.509
HOXD3
M05102_2.00
Homo sapiens
YTAAYGAY
RTCRTTAR
SELEX
Yin et al.(2017)
HOXD3_FL_Methyl-HT-SELEX_1
0.653
0.509
HOXD3
M05103_2.00
Homo sapiens
CTAATKAC
GTMATTAG
SELEX
Yin et al.(2017)
HOXD3_FL_Methyl-HT-SELEX_2
0.653
0.509
Hoxb3
M00504_2.00
Mus musculus
NTAATKRNN
NNYMATTAN
PBM
Berger et al.(2008)
Hoxb3_1720
0.653
0.491
HOXB3
M03126_2.00
Homo sapiens
NBTAATKRNN
NNYMATTAVN
SELEX
Jolma et al.(2013)
HOXB3_1
0.653
0.491
NEMVEDRAFT_v1g205636
M02150_2.00
Nematostella vectensis
NTAATTAN
NTAATTAN
PBM
Weirauch et al.(2014)
pTH5491
0.653
0.561
HOXC4
M00329_2.00
Homo sapiens
NTAATKRNN
NNYMATTAN
PBM
Barrera et al.(2016)
HOXC4_R158L
0.639
0.456
NOTO
M03241_2.00
Homo sapiens
NNTAATKWRN
NYWMATTANN
SELEX
Jolma et al.(2013)
NOTO_1
0.638
0.561
NOTO
M05390_2.00
Homo sapiens
BTAATKRV
BYMATTAV
SELEX
Yin et al.(2017)
NOTO_eDBD_HT-SELEX
0.638
0.561
NOTO
M05391_2.00
Homo sapiens
BTMATKRV
BYMATKAV
SELEX
Yin et al.(2017)
NOTO_eDBD_Methyl-HT-SELEX
0.638
0.561
CG11085
M03857_2.00
Drosophila melanogaster
BTAAWYGN
NCRWTTAV
SELEX
Nitta et al.(2015)
CG11085_1
0.634
0.421
CG11085
M03858_2.00
Drosophila melanogaster
NTAAWCGN
NCGWTTAN
SELEX
Nitta et al.(2015)
CG11085_2
0.634
0.421
CG11085
M06532_2.00
Drosophila melanogaster
TTAATDG
CHATTAA
B1H
Mathelier et al.(2014)
MA0171.1
0.634
0.421
CG11085
M06339_2.00
Drosophila melanogaster
NTTAATDGV
BCHATTAAN
B1H
Zhu et al.(2011)
CG11085_Cell_FBgn0030408
0.634
0.421
CG11085
M06340_2.00
Drosophila melanogaster
NHTAAWBRNN
NNYVWTTADN
B1H
Zhu et al.(2011)
CG11085_SOLEXA_FBgn0030408
0.634
0.421
Hmx2
M00507_2.00
Mus musculus
NHRANYGNNN
NNNCRNTYDN
PBM
Berger et al.(2008)
Hmx2_3424
0.633
0.509
Hmx1
M00524_2.00
Mus musculus
NHDAKYRNNN
NNNYRMTHDN
PBM
Berger et al.(2008)
Hmx1_3423
0.633
0.509
HMX1
M03243_2.00
Homo sapiens
NNTTAAKTGNY
RNCAMTTAANN
SELEX
Jolma et al.(2013)
HMX1_1
0.633
0.509
HMX2
M03234_2.00
Homo sapiens
NNTTAAKTGNN
NNCAMTTAANN
SELEX
Jolma et al.(2013)
HMX2_1
0.633
0.509
HMX3
M03233_2.00
Homo sapiens
NNNTAAKTGNN
NNCAMTTANNN
SELEX
Jolma et al.(2013)
HMX3_1
0.633
0.509
Hmx
M03882_2.00
Drosophila melanogaster
NYRAKYGN
NCRMTYRN
SELEX
Nitta et al.(2015)
Hmx_1
0.633
0.509
HMX1
M05392_2.00
Homo sapiens
BNYAAKTGN
NCAMTTRNV
SELEX
Yin et al.(2017)
HMX1_eDBD_HT-SELEX
0.633
0.509
HMX2
M05373_2.00
Homo sapiens
GNHRAKYGS
SCRMTYDNC
SELEX
Yin et al.(2017)
HMX2_eDBD_HT-SELEX
0.633
0.509
HMX2
M05375_2.00
Homo sapiens
NTTAAKTGNN
NNCAMTTAAN
SELEX
Yin et al.(2017)
HMX2_FL_HT-SELEX
0.633
0.509
Hmx
M06554_2.00
Drosophila melanogaster
TTAATTG
CAATTAA
B1H
Mathelier et al.(2014)
MA0192.1
0.633
0.509
Hmx
M06386_2.00
Drosophila melanogaster
TTAATTG
CAATTAA
B1H
Zhu et al.(2011)
Hmx_Cell_FBgn0085448
0.633
0.509
Hmx
M06387_2.00
Drosophila melanogaster
TTAATTG
CAATTAA
B1H
Zhu et al.(2011)
Hmx_SOLEXA_FBgn0085448
0.633
0.509
HMX3
M10754_2.00
Homo sapiens
CAAGTGCGTG
CACGCACTTG
Transfac
Matys et al.(2006)
V$HMX1_01
0.633
0.509
HMX1
M05393_2.00
Homo sapiens
VNYAAKTGB
VCAMTTRNB
SELEX
Yin et al.(2017)
HMX1_eDBD_Methyl-HT-SELEX
0.633
0.509
HMX2
M05374_2.00
Homo sapiens
NNTAAKTGN
NCAMTTANN
SELEX
Yin et al.(2017)
HMX2_eDBD_Methyl-HT-SELEX
0.633
0.509
HMX2
M05376_2.00
Homo sapiens
NTTAAKTGNN
NNCAMTTAAN
SELEX
Yin et al.(2017)
HMX2_FL_Methyl-HT-SELEX
0.633
0.509
en
M03793_2.00
Drosophila melanogaster
NTAATTRN
NYAATTAN
SELEX
Nitta et al.(2015)
en_1
0.631
0.526
en
M06485_2.00
Drosophila melanogaster
YTAATTR
YAATTAR
B1H
Mathelier et al.(2014)
MA0220.1
0.631
0.526
en
M06236_2.00
Drosophila melanogaster
NYTAATTR
YAATTARN
B1H
Zhu et al.(2011)
En_Cell_FBgn0000577
0.631
0.526
en
M06237_2.00
Drosophila melanogaster
DBTAATKR
YMATTAVH
B1H
Zhu et al.(2011)
en_FlyReg_FBgn0000577
0.631
0.526
en
M06238_2.00
Drosophila melanogaster
NNNTAATTRN
NYAATTANNN
B1H
Zhu et al.(2011)
en_SOLEXA_2_FBgn0000577
0.631
0.526
en
M06239_2.00
Drosophila melanogaster
NTAATTR
YAATTAN
B1H
Zhu et al.(2011)
En_SOLEXA_FBgn0000577
0.631
0.526
en
M09677_2.00
Drosophila melanogaster
HTAATTRN
NYAATTAD
Misc
Kulakovskiy et al.(2009)
en
0.631
0.526
en
M10785_2.00
Drosophila melanogaster
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$EN_Q6
0.631
0.526
inv
M06491_2.00
Drosophila melanogaster
DYTAATTR
YAATTARH
B1H
Mathelier et al.(2014)
MA0229.1
0.631
0.509
inv
M06255_2.00
Drosophila melanogaster
DYTAATTR
YAATTARH
B1H
Zhu et al.(2011)
Inv_Cell_FBgn0001269
0.631
0.509
inv
M06256_2.00
Drosophila melanogaster
NHTAATTRV
BYAATTADN
B1H
Zhu et al.(2011)
inv_SOLEXA_2_FBgn0001269
0.631
0.509
inv
M06257_2.00
Drosophila melanogaster
NHTAATTRV
BYAATTADN
B1H
Zhu et al.(2011)
inv_SOLEXA_5_FBgn0001269
0.631
0.509
Q24780_9CNID
M02205_2.00
Eleutheria dichotoma
NNYTAATTAMN
NKTAATTARNN
PBM
Weirauch et al.(2014)
pTH6308
0.631
0.491
Pdx1
M00446_2.00
Mus musculus
NWRAYNNN
NNNRTYWN
PBM
Berger et al.(2008)
Ipf1_3815
0.631
0.456
SPU_026099
M02175_2.00
Strongylocentrotus purpuratus
KTAATTRB
VYAATTAM
PBM
Weirauch et al.(2014)
pTH6140
0.631
0.456
PDX1
M03155_2.00
Homo sapiens
NTAATTRNNNYTAATTRN
NYAATTARNNNYAATTAN
SELEX
Jolma et al.(2013)
PDX1_1
0.631
0.456
PDX1
M03156_2.00
Homo sapiens
BTAATKRN
NYMATTAV
SELEX
Jolma et al.(2013)
PDX1_2
0.631
0.456
PDX1
M05161_2.00
Homo sapiens
YTAATKRB
VYMATTAR
SELEX
Yin et al.(2017)
PDX1_eDBD_HT-SELEX
0.631
0.456
PDX1
M09147_2.00
Homo sapiens
TGATWGATK
MATCWATCA
Misc
Kulakovskiy et al.(2013)
PDX1_HUMAN.H11MO.0.A
0.631
0.456
Pdx1
M09192_2.00
Mus musculus
VYTAATGRB
VYCATTARB
Misc
Kulakovskiy et al.(2013)
PDX1_MOUSE.H11MO.0.B
0.631
0.456
Pdx1
M09571_2.00
Mus musculus
TGATTRATKR
YMATYAATCA
Misc
Heinz et al.(2010)
Islet-Pdx1_SRA008281
0.631
0.456
PDX1
M10699_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_01
0.631
0.456
PDX1
M10700_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_02
0.631
0.456
PDX1
M10701_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_03
0.631
0.456
PDX1
M10702_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_04
0.631
0.456
PDX1
M10703_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_05
0.631
0.456
PDX1
M10704_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q4_01
0.631
0.456
PDX1
M10705_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q4
0.631
0.456
PDX1
M10706_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q5_01
0.631
0.456
PDX1
M10707_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q5
0.631
0.456
PDX1
M10708_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q6
0.631
0.456
PDX1
M05162_2.00
Homo sapiens
HTAAYGAB
VTCRTTAD
SELEX
Yin et al.(2017)
PDX1_eDBD_Methyl-HT-SELEX_1
0.631
0.456
PDX1
M05163_2.00
Homo sapiens
YTAATKRB
VYMATTAR
SELEX
Yin et al.(2017)
PDX1_eDBD_Methyl-HT-SELEX_2
0.631
0.456
zfh-2
M01850_2.00
Caenorhabditis elegans
NYTAATTARNN
NNYTAATTARN
PBM
Weirauch et al.(2014)
pTH6132
0.630
0.368
En2
M00484_2.00
Mus musculus
NNYHATHN
NDATDRNN
PBM
Berger et al.(2008)
En2_0952
0.628
0.474
EN2
M03189_2.00
Homo sapiens
NNTAATTRNN
NNYAATTANN
SELEX
Jolma et al.(2013)
EN2_1
0.628
0.474
EN2
M03190_2.00
Homo sapiens
VBTAATTRNN
NNYAATTAVB
SELEX
Jolma et al.(2013)
EN2_2
0.628
0.474
En2
M03276_2.00
Mus musculus
VBTAATTASN
NSTAATTAVB
SELEX
Jolma et al.(2013)
En2_1
0.628
0.474
EN2
M05237_2.00
Homo sapiens
BTAATTRV
BYAATTAV
SELEX
Yin et al.(2017)
EN2_eDBD_HT-SELEX
0.628
0.474
EN2
M05238_2.00
Homo sapiens
VHTDAYGHB
VDCRTHADB
SELEX
Yin et al.(2017)
EN2_eDBD_Methyl-HT-SELEX_1
0.628
0.474
EN2
M05239_2.00
Homo sapiens
BTAATTRV
BYAATTAV
SELEX
Yin et al.(2017)
EN2_eDBD_Methyl-HT-SELEX_2
0.628
0.474
En1
M00519_2.00
Mus musculus
HNWTNNN
NNNAWND
PBM
Berger et al.(2008)
En1_3123
0.627
0.456
EN1
M03180_2.00
Homo sapiens
NNTAATTRVB
VBYAATTANN
SELEX
Jolma et al.(2013)
EN1_1
0.627
0.456
EN1
M03181_2.00
Homo sapiens
TAATTRSNYAATTA
TAATTRNSYAATTA
SELEX
Jolma et al.(2013)
EN1_2
0.627
0.456
EN1
M03182_2.00
Homo sapiens
BTAATTRN
NYAATTAV
SELEX
Jolma et al.(2013)
EN1_3
0.627
0.456
EN1
M03183_2.00
Homo sapiens
TDAKKRSNYMATTA
TAATKRNSYMMTHA
SELEX
Jolma et al.(2013)
EN1_4
0.627
0.456
EN1
M05218_2.00
Homo sapiens
NTAATTRV
BYAATTAN
SELEX
Yin et al.(2017)
EN1_eDBD_HT-SELEX
0.627
0.456
EN1
M05871_2.00
Homo sapiens
VNYAATTA
TAATTRNB
SMiLE-seq
Isakova et al.(2017)
EN1
0.627
0.456
EN1
M10714_2.00
Homo sapiens
RTDDTBB
VVAHHAY
Transfac
Matys et al.(2006)
V$EN1_01
0.627
0.456
EN1
M05219_2.00
Homo sapiens
NTAAYGAB
VTCRTTAN
SELEX
Yin et al.(2017)
EN1_eDBD_Methyl-HT-SELEX_1
0.627
0.456
EN1
M05220_2.00
Homo sapiens
NTAATTRV
BYAATTAN
SELEX
Yin et al.(2017)
EN1_eDBD_Methyl-HT-SELEX_2
0.627
0.456
zen2
M02118_2.00
Drosophila melanogaster
NNTAATKRNN
NNYMATTANN
PBM
Weirauch et al.(2014)
pTH5479
0.627
0.526
zen2
M03806_2.00
Drosophila melanogaster
BTAATKAS
STMATTAV
SELEX
Nitta et al.(2015)
zen2_1
0.627
0.526
zen2
M03807_2.00
Drosophila melanogaster
BTAATKWNNVRNNNNYBNNWMATTAV
BTAATKWNNVRNNNNYBNNWMATTAV
SELEX
Nitta et al.(2015)
zen2_2
0.627
0.526
zen2
M06501_2.00
Drosophila melanogaster
BTAATKA
TMATTAV
B1H
Mathelier et al.(2014)
MA0257.1
0.627
0.526
zen2
M06279_2.00
Drosophila melanogaster
HNBTAATKA
TMATTAVND
B1H
Zhu et al.(2011)
Zen2_Cell_FBgn0004054
0.627
0.526
zen2
M06280_2.00
Drosophila melanogaster
NNNTAATKRN
NYMATTANNN
B1H
Zhu et al.(2011)
zen2_SOLEXA_2_FBgn0004054
0.627
0.526
zen2
M06281_2.00
Drosophila melanogaster
YTAATKR
YMATTAR
B1H
Zhu et al.(2011)
Zen2_SOLEXA_FBgn0004054
0.627
0.526
ind
M06527_2.00
Drosophila melanogaster
YTAATKA
TMATTAR
B1H
Mathelier et al.(2014)
MA0228.1
0.626
0.491
ind
M06329_2.00
Drosophila melanogaster
YVYTAATKA
TMATTARBR
B1H
Zhu et al.(2011)
Ind_Cell_FBgn0025776
0.626
0.491
Hoxc5
M00422_2.00
Mus musculus
NWRATND
HNATYWN
PBM
Berger et al.(2008)
Hoxc5_2630
0.626
0.474
Gsx2
M00469_2.00
Mus musculus
NTAATDDNN
NNHHATTAN
PBM
Berger et al.(2008)
Gsh2_3990
0.626
0.474
GSX1
M03205_2.00
Homo sapiens
NNTAATKRNN
NNYMATTANN
SELEX
Jolma et al.(2013)
GSX1_1
0.626
0.474
GSX2
M03227_2.00
Homo sapiens
NNTAATKRNN
NNYMATTANN
SELEX
Jolma et al.(2013)
GSX2_1
0.626
0.474
Scr
M03799_2.00
Drosophila melanogaster
BTAATKRB
VYMATTAV
SELEX
Nitta et al.(2015)
Scr_1
0.626
0.474
GSX1
M05271_2.00
Homo sapiens
NYMATNRN
NYNATKRN
SELEX
Yin et al.(2017)
GSX1_eDBD_HT-SELEX
0.626
0.474
GSX2
M05329_2.00
Homo sapiens
HTAATKRS
SYMATTAD
SELEX
Yin et al.(2017)
GSX2_eDBD_HT-SELEX
0.626
0.474
Scr
M06496_2.00
Drosophila melanogaster
YTAATKA
TMATTAR
B1H
Mathelier et al.(2014)
MA0203.1
0.626
0.474
Scr
M06266_2.00
Drosophila melanogaster
HVYTAATKA
TMATTARBD
B1H
Zhu et al.(2011)
Scr_Cell_FBgn0003339
0.626
0.474
Scr
M06267_2.00
Drosophila melanogaster
YTAATKR
YMATTAR
B1H
Zhu et al.(2011)
Scr_SOLEXA_FBgn0003339
0.626
0.474
GSX1
M05272_2.00
Homo sapiens
NTAAYGAB
VTCRTTAN
SELEX
Yin et al.(2017)
GSX1_eDBD_Methyl-HT-SELEX
0.626
0.474
GSX2
M05330_2.00
Homo sapiens
HTAAYGAB
VTCRTTAD
SELEX
Yin et al.(2017)
GSX2_eDBD_Methyl-HT-SELEX
0.626
0.474
Hoxa5
M00478_2.00
Mus musculus
NTAATNDNN
NNHNATTAN
PBM
Berger et al.(2008)
Hoxa5_3415
0.626
0.456
Hoxb5
M00480_2.00
Mus musculus
NWDWTNNNN
NNNNAWHWN
PBM
Berger et al.(2008)
Hoxb5_3122
0.626
0.456
HOXB5
M03125_2.00
Homo sapiens
NNKAATKRNN
NNYMATTMNN
SELEX
Jolma et al.(2013)
HOXB5_1
0.626
0.456
Dfd
M03784_2.00
Drosophila melanogaster
VNTAAYKRBN
NVYMRTTANB
SELEX
Nitta et al.(2015)
Dfd_1
0.626
0.456
Dfd
M03785_2.00
Drosophila melanogaster
VYTAATKAYN
NRTMATTARB
SELEX
Nitta et al.(2015)
Dfd_2
0.626
0.456
HOXA5
M04968_2.00
Homo sapiens
STAATKRS
SYMATTAS
SELEX
Yin et al.(2017)
HOXA5_eDBD_HT-SELEX
0.626
0.456
HOXA5
M04971_2.00
Homo sapiens
NTMATKRB
VYMATKAN
SELEX
Yin et al.(2017)
HOXA5_FL_HT-SELEX
0.626
0.456
HOXB5
M05051_2.00
Homo sapiens
NTAATKRV
BYMATTAN
SELEX
Yin et al.(2017)
HOXB5_eDBD_HT-SELEX
0.626
0.456
HOXB5
M05054_2.00
Homo sapiens
STMATKAB
VTMATKAS
SELEX
Yin et al.(2017)
HOXB5_FL_HT-SELEX
0.626
0.456
Dfd
M06481_2.00
Drosophila melanogaster
YTAATGA
TCATTAR
B1H
Mathelier et al.(2014)
MA0186.1
0.626
0.456
Dfd
M06226_2.00
Drosophila melanogaster
VYTAATGA
TCATTAAB
B1H
Zhu et al.(2011)
Dfd_Cell_FBgn0000439
0.626
0.456
Dfd
M06227_2.00
Drosophila melanogaster
TTAATKRY
RYMATTAA
B1H
Zhu et al.(2011)
Dfd_FlyReg_FBgn0000439
0.626
0.456
Dfd
M06228_2.00
Drosophila melanogaster
NBTAATKR
YMATTAVN
B1H
Zhu et al.(2011)
Dfd_SOLEXA_FBgn0000439
0.626
0.456
Dfd
M09675_2.00
Drosophila melanogaster
TTAATKRB
VYMATTAA
Misc
Kulakovskiy et al.(2009)
Dfd
0.626
0.456
Dfd
M10784_2.00
Drosophila melanogaster
NNNNRKTAATNNNNNN
NNNNNNATTAMYNNNN
Transfac
Matys et al.(2006)
I$DFD_01
0.626
0.456
HOXA5
M10652_2.00
Homo sapiens
NGRDBKBDHNBAVTAATKRRGRDVDDDGSR
YSCHHHBHYCYYMATTABTVNDHVMVHYCN
Transfac
Matys et al.(2006)
V$HOX13_01
0.626
0.456
HOXA5
M08457_2.00
Homo sapiens
CDBWAATK
MATTWVHG
COMPILED
Mathelier et al.(2014)
MA0158.1
0.626
0.456
HOXA5
M04969_2.00
Homo sapiens
BTAATKRV
BYMATTAV
SELEX
Yin et al.(2017)
HOXA5_eDBD_Methyl-HT-SELEX_1
0.626
0.456
HOXA5
M04970_2.00
Homo sapiens
NTAAYGAY
RTCRTTAN
SELEX
Yin et al.(2017)
HOXA5_eDBD_Methyl-HT-SELEX_2
0.626
0.456
HOXA5
M04972_2.00
Homo sapiens
NTMATKRN
NYMATKAN
SELEX
Yin et al.(2017)
HOXA5_FL_Methyl-HT-SELEX_1
0.626
0.456
HOXA5
M04973_2.00
Homo sapiens
NTAAYGAY
RTCRTTAN
SELEX
Yin et al.(2017)
HOXA5_FL_Methyl-HT-SELEX_2
0.626
0.456
HOXB5
M05052_2.00
Homo sapiens
NTMATKRN
NYMATKAN
SELEX
Yin et al.(2017)
HOXB5_eDBD_Methyl-HT-SELEX_1
0.626
0.456
HOXB5
M05053_2.00
Homo sapiens
NTAAYGAY
RTCRTTAN
SELEX
Yin et al.(2017)
HOXB5_eDBD_Methyl-HT-SELEX_2
0.626
0.456
HOXB5
M05055_2.00
Homo sapiens
NTMATKAB
VTMATKAN
SELEX
Yin et al.(2017)
HOXB5_FL_Methyl-HT-SELEX_1
0.626
0.456
HOXB5
M05056_2.00
Homo sapiens
HTAAYGAY
RTCRTTAD
SELEX
Yin et al.(2017)
HOXB5_FL_Methyl-HT-SELEX_2
0.626
0.456
B-H1
M03829_2.00
Drosophila melanogaster
VNTAAWYGNN
NNCRWTTANB
SELEX
Nitta et al.(2015)
B-H1_1
0.625
0.474
B-H1
M03830_2.00
Drosophila melanogaster
SNTAADBGN
NCVHTTANS
SELEX
Nitta et al.(2015)
B-H1_2
0.625
0.474
B-H1
M06512_2.00
Drosophila melanogaster
HTAAWYG
CRWTTAD
B1H
Mathelier et al.(2014)
MA0168.1
0.625
0.474
Barhl2
M00460_2.00
Mus musculus
NTAAWNRNN
NNYNWTTAN
PBM
Berger et al.(2008)
Barhl2_3868
0.625
0.456
ENSTNIG00000006040
M02106_2.00
Tetraodon nigroviridis
NNNBTAAWHRBNN
NNVYDWTTAVNNN
PBM
Weirauch et al.(2014)
pTH6503
0.625
0.456
BARHL2
M03157_2.00
Homo sapiens
NNTAAWYGNN
NNCRWTTANN
SELEX
Jolma et al.(2013)
BARHL2_1
0.625
0.456
BARHL2
M03158_2.00
Homo sapiens
NNTAAWBGNN
NNCVWTTANN
SELEX
Jolma et al.(2013)
BARHL2_2
0.625
0.456
BARHL2
M03159_2.00
Homo sapiens
TAAWYGNNNNTAAWYR
YRWTTANNNNCRWTTA
SELEX
Jolma et al.(2013)
BARHL2_3
0.625
0.456
BARHL2
M03160_2.00
Homo sapiens
NNTAAWYGNH
DNCRWTTANN
SELEX
Jolma et al.(2013)
BARHL2_4
0.625
0.456
BARHL2
M03161_2.00
Homo sapiens
NNTAAWYGNN
NNCRWTTANN
SELEX
Jolma et al.(2013)
BARHL2_5
0.625
0.456
BARHL2
M03162_2.00
Homo sapiens
TAAWYGNYNHTAAWYG
CRWTTADNRNCRWTTA
SELEX
Jolma et al.(2013)
BARHL2_6
0.625
0.456
B-H2
M03810_2.00
Drosophila melanogaster
VNTAAAYGNH
DNCRTTTANB
SELEX
Nitta et al.(2015)
B-H2_1
0.625
0.456
B-H2
M03811_2.00
Drosophila melanogaster
SNTAADBGN
NCVHTTANS
SELEX
Nitta et al.(2015)
B-H2_2
0.625
0.456
BARHL2
M05164_2.00
Homo sapiens
HTAAAYGNY
RNCRTTTAD
SELEX
Yin et al.(2017)
BARHL2_eDBD_HT-SELEX_1
0.625
0.456
BARHL2
M05165_2.00
Homo sapiens
NTAAWTGNB
VNCAWTTAN
SELEX
Yin et al.(2017)
BARHL2_eDBD_HT-SELEX_2
0.625
0.456
BARHL2
M05167_2.00
Homo sapiens
NTAAWYGN
NCRWTTAN
SELEX
Yin et al.(2017)
BARHL2_FL_HT-SELEX_1
0.625
0.456
BARHL2
M05168_2.00
Homo sapiens
NTAAWYGN
NCRWTTAN
SELEX
Yin et al.(2017)
BARHL2_FL_HT-SELEX_2
0.625
0.456
B-H2
M06503_2.00
Drosophila melanogaster
WTAATTG
CAATTAW
B1H
Mathelier et al.(2014)
MA0169.1
0.625
0.456
BARHL2
M05166_2.00
Homo sapiens
NTAAWTGNB
VNCAWTTAN
SELEX
Yin et al.(2017)
BARHL2_eDBD_Methyl-HT-SELEX
0.625
0.456
BARHL2
M05169_2.00
Homo sapiens
NTAAWTGN
NCAWTTAN
SELEX
Yin et al.(2017)
BARHL2_FL_Methyl-HT-SELEX
0.625
0.456
Barhl1
M00433_2.00
Mus musculus
NTAAWNRNN
NNYNWTTAN
PBM
Berger et al.(2008)
Barhl1_2590
0.625
0.439
Barhl1
M03258_2.00
Mus musculus
NNTAAWYGNH
DNCRWTTANN
SELEX
Jolma et al.(2013)
Barhl1_1
0.625
0.439
Barhl1
M03259_2.00
Mus musculus
NNTAADNRNN
NNYNHTTANN
SELEX
Jolma et al.(2013)
Barhl1_2
0.625
0.439
Barhl1
M03260_2.00
Mus musculus
TAAWYGNYNNTAAWYG
CRWTTANNRNCRWTTA
SELEX
Jolma et al.(2013)
Barhl1_3
0.625
0.439
BARHL1
M05091_2.00
Homo sapiens
NTAAWYGN
NCRWTTAN
SELEX
Yin et al.(2017)
BARHL1_eDBD_HT-SELEX_1
0.625
0.439
BARHL1
M05092_2.00
Homo sapiens
NTAADBGN
NCVHTTAN
SELEX
Yin et al.(2017)
BARHL1_eDBD_HT-SELEX_2
0.625
0.439
BARHL1
M05093_2.00
Homo sapiens
NTAADKGN
NCMHTTAN
SELEX
Yin et al.(2017)
BARHL1_eDBD_Methyl-HT-SELEX
0.625
0.439
zen
M03805_2.00
Drosophila melanogaster
BTAATKRB
VYMATTAV
SELEX
Nitta et al.(2015)
zen_1
0.625
0.474
zen
M06500_2.00
Drosophila melanogaster
YTAATKA
TMATTAR
B1H
Mathelier et al.(2014)
MA0256.1
0.625
0.474
zen
M06276_2.00
Drosophila melanogaster
NBYTAATKA
TMATTARBN
B1H
Zhu et al.(2011)
Zen_Cell_FBgn0004053
0.625
0.474
zen
M06277_2.00
Drosophila melanogaster
AANWTWAWTG
CAWTWAWNTT
B1H
Zhu et al.(2011)
zen_FlyReg_FBgn0004053
0.625
0.474
zen
M06278_2.00
Drosophila melanogaster
NYTAATKA
TMATTARN
B1H
Zhu et al.(2011)
Zen_SOLEXA_FBgn0004053
0.625
0.474
Noto
M02101_2.00
Mus musculus
NNHHATDDNN
NNHHATDDNN
PBM
Weirauch et al.(2014)
pTH6268
0.620
0.544
Q0N4M8_NEMVE
M02166_2.00
Nematostella vectensis
HTAATKAC
GTMATTAD
PBM
Weirauch et al.(2014)
pTH6215
0.620
0.474
Hmx3_CONSTRUCT
M00537_2.00
PBM CONSTRUCTS
NHDADYRNN
NNYRHTHDN
PBM
Berger et al.(2008)
Hmx3_3490
0.620
0.491
VENTX
M02091_2.00
Homo sapiens
TTAATTAB
VTAATTAA
PBM
Weirauch et al.(2014)
pTH5490
0.620
0.474
VENTX
M00305_2.00
Homo sapiens
DTAATTRR
YYAATTAH
PBM
Barrera et al.(2016)
VENTX_REF
0.620
0.474
VENTX
M03169_2.00
Homo sapiens
YTAATBGNT
ANCVATTAR
SELEX
Jolma et al.(2013)
VENTX_1
0.620
0.474
VENTX
M03170_2.00
Homo sapiens
VSYTAATSGRWAAMCGATTAG
CTAATCGKTTWYCSATTARSB
SELEX
Jolma et al.(2013)
VENTX_2
0.620
0.474
VENTX
M05188_2.00
Homo sapiens
CGHTAATBG
CVATTADCG
SELEX
Yin et al.(2017)
VENTX_FL_HT-SELEX_1
0.620
0.474
VENTX
M05189_2.00
Homo sapiens
VNTAATBRNN
NNYVATTANB
SELEX
Yin et al.(2017)
VENTX_FL_HT-SELEX_2
0.620
0.474
VENTX
M05190_2.00
Homo sapiens
VHTAATKRNN
NNYMATTADB
SELEX
Yin et al.(2017)
VENTX_FL_Methyl-HT-SELEX
0.620
0.474
VENTX
M00303_2.00
Homo sapiens
NVTAATTANNN
NNNTAATTABN
PBM
Barrera et al.(2016)
VENTX_E101K
0.620
0.456
VENTX
M00304_2.00
Homo sapiens
NATAYATAB
VTATRTATN
PBM
Barrera et al.(2016)
VENTX_R143C
0.620
0.456
NEMVEDRAFT_v1g8907
M02154_2.00
Nematostella vectensis
NTAATDRNNN
NNNYHATTAN
PBM
Weirauch et al.(2014)
pTH6483
0.617
0.614
Otp
M00417_2.00
Mus musculus
NNHAATND
HNATTDNN
PBM
Berger et al.(2008)
Otp_3496
0.614
0.474
NEMVEDRAFT_v1g81309
M02152_2.00
Nematostella vectensis
NTAATDNNN
NNNHATTAN
PBM
Weirauch et al.(2014)
pTH5477
0.610
0.526
otp
M03834_2.00
Drosophila melanogaster
BTAATTRN
NYAATTAV
SELEX
Nitta et al.(2015)
otp_1
0.610
0.456
otp
M03835_2.00
Drosophila melanogaster
YTAATTRV
BYAATTAR
SELEX
Nitta et al.(2015)
otp_2
0.610
0.456
otp
M06516_2.00
Drosophila melanogaster
YTAATTA
TAATTAR
B1H
Mathelier et al.(2014)
MA0236.1
0.610
0.456
otp
M06309_2.00
Drosophila melanogaster
HYTAATTA
TAATTARD
B1H
Zhu et al.(2011)
Otp_Cell_FBgn0015524
0.610
0.456
otp
M06310_2.00
Drosophila melanogaster
YTAATTR
YAATTAR
B1H
Zhu et al.(2011)
Otp_SOLEXA_FBgn0015524
0.610
0.456
Barx1
M00413_2.00
Mus musculus
NNTAAYBDNN
NNHVRTTANN
PBM
Berger et al.(2008)
Barx1_2877
0.603
0.491
barx1
M02107_2.00
Tetraodon nigroviridis
NTAAYNNNN
NNNNRTTAN
PBM
Weirauch et al.(2014)
pTH6449
0.603
0.491
BARX1
M03144_2.00
Homo sapiens
TAATBGNWWWTTAATBR
YVATTAAWWWNCVATTA
SELEX
Jolma et al.(2013)
BARX1_1
0.603
0.491
BARX1
M03145_2.00
Homo sapiens
NTAATBRN
NYVATTAN
SELEX
Jolma et al.(2013)
BARX1_2
0.603
0.491
Barx1
M09181_2.00
Mus musculus
NNWAAKKGYTWH
DWARCMMTTWNN
Misc
Kulakovskiy et al.(2013)
BARX1_MOUSE.H11MO.0.C
0.603
0.491
HOXA2
M02083_2.00
Homo sapiens
NNNDHHNNN
NNNDDHNNN
PBM
Weirauch et al.(2014)
pTH5887
0.603
0.491
Hoxa2
M00403_2.00
Mus musculus
NTAATKRNN
NNYMATTAN
PBM
Berger et al.(2008)
Hoxa2_3079
0.603
0.491
HOXA2
M03097_2.00
Homo sapiens
NBTAATKRNN
NNYMATTAVN
SELEX
Jolma et al.(2013)
HOXA2_1
0.603
0.491
HOXB2
M03213_2.00
Homo sapiens
NNTAATKRNN
NNYMATTANN
SELEX
Jolma et al.(2013)
HOXB2_1
0.603
0.491
Hoxa2
M03251_2.00
Mus musculus
NNTAATKRNN
NNYMATTANN
SELEX
Jolma et al.(2013)
Hoxa2_1
0.603
0.491
HOXA2
M04962_2.00
Homo sapiens
NTAATKRV
BYMATTAN
SELEX
Yin et al.(2017)
HOXA2_eDBD_HT-SELEX
0.603
0.491
HOXA2
M04965_2.00
Homo sapiens
NTAATKAB
VTMATTAN
SELEX
Yin et al.(2017)
HOXA2_FL_HT-SELEX
0.603
0.491
HOXB2
M05292_2.00
Homo sapiens
BTAATKRV
BYMATTAV
SELEX
Yin et al.(2017)
HOXB2_eDBD_HT-SELEX
0.603
0.491
Hoxa2
M09566_2.00
Mus musculus
DTGATKGATKDB
VHMATCMATCAH
Misc
Heinz et al.(2010)
mES-Hoxa2_Donaldson_et_al.
0.603
0.491
HOXA2
M04963_2.00
Homo sapiens
NTAATTAN
NTAATTAN
SELEX
Yin et al.(2017)
HOXA2_eDBD_Methyl-HT-SELEX_1
0.603
0.491
HOXA2
M04964_2.00
Homo sapiens
HTAAYGAB
VTCRTTAD
SELEX
Yin et al.(2017)
HOXA2_eDBD_Methyl-HT-SELEX_2
0.603
0.491
HOXA2
M04966_2.00
Homo sapiens
NTAATKAB
VTMATTAN
SELEX
Yin et al.(2017)
HOXA2_FL_Methyl-HT-SELEX_1
0.603
0.491
HOXA2
M04967_2.00
Homo sapiens
HTAAYGAB
VTCRTTAD
SELEX
Yin et al.(2017)
HOXA2_FL_Methyl-HT-SELEX_2
0.603
0.491
HOXB2
M05293_2.00
Homo sapiens
NTAATKRN
NYMATTAN
SELEX
Yin et al.(2017)
HOXB2_eDBD_Methyl-HT-SELEX_1
0.603
0.491
HOXB2
M05294_2.00
Homo sapiens
HTAAYGAB
VTCRTTAD
SELEX
Yin et al.(2017)
HOXB2_eDBD_Methyl-HT-SELEX_2
0.603
0.491
SNAPOd2T00003340001
M02228_2.00
Oikopleura dioica
NNNTAATWWN
NWWATTANNN
PBM
Weirauch et al.(2014)
pTH6369
0.601
0.386
Lmx1a
M00432_2.00
Mus musculus
NNDATKRN
NYMATHNN
PBM
Berger et al.(2008)
Lmx1a_2238
0.601
0.351
Lmx1b
M00482_2.00
Mus musculus
NDADDRN
NYHHTHN
PBM
Berger et al.(2008)
Lmx1b_3433
0.601
0.351
LMX1A
M03179_2.00
Homo sapiens
NTAATTAV
BTAATTAN
SELEX
Jolma et al.(2013)
LMX1A_1
0.601
0.351
LMX1B
M03153_2.00
Homo sapiens
NTWATTRN
NYAATWAN
SELEX
Jolma et al.(2013)
LMX1B_1
0.601
0.351
LMX1B
M03154_2.00
Homo sapiens
DTAATTRV
BYAATTAH
SELEX
Jolma et al.(2013)
LMX1B_2
0.601
0.351
CG32105
M03873_2.00
Drosophila melanogaster
KTAATTAR
YTAATTAM
SELEX
Nitta et al.(2015)
CG32105_1
0.601
0.351
LMX1A
M05215_2.00
Homo sapiens
YTAATTAV
BTAATTAR
SELEX
Yin et al.(2017)
LMX1A_eDBD_HT-SELEX
0.601
0.351
LMX1B
M05153_2.00
Homo sapiens
NNNBTAATTAN
NTAATTAVNNN
SELEX
Yin et al.(2017)
LMX1B_eDBD_HT-SELEX
0.601
0.351
LMX1B
M05156_2.00
Homo sapiens
NDDTTAATTAH
DTAATTAAHHN
SELEX
Yin et al.(2017)
LMX1B_FL_HT-SELEX
0.601
0.351
CG4328
M06538_2.00
Drosophila melanogaster
WTWATTR
YAATWAW
B1H
Mathelier et al.(2014)
MA0182.1
0.601
0.351
CG32105
M06546_2.00
Drosophila melanogaster
YTAATTA
TAATTAR
B1H
Mathelier et al.(2014)
MA0178.1
0.601
0.351
CG32105
M06368_2.00
Drosophila melanogaster
WYTAATTAV
BTAATTARW
B1H
Zhu et al.(2011)
CG32105_Cell_FBgn0052105
0.601
0.351
CG32105
M06369_2.00
Drosophila melanogaster
NNTWATTR
YAATWANN
B1H
Zhu et al.(2011)
CG32105_SOLEXA_FBgn0052105
0.601
0.351
CG4328
M06352_2.00
Drosophila melanogaster
NWWWATTR
YAATWWWN
B1H
Zhu et al.(2011)
CG4328_Cell_FBgn0036274
0.601
0.351
CG4328
M06353_2.00
Drosophila melanogaster
YAATWANN
NNTWATTR
B1H
Zhu et al.(2011)
CG4328_SOLEXA_FBgn0036274
0.601
0.351
LMX1A
M05216_2.00
Homo sapiens
DTAAYGHN
NDCRTTAH
SELEX
Yin et al.(2017)
LMX1A_eDBD_Methyl-HT-SELEX_1
0.601
0.351
LMX1A
M05217_2.00
Homo sapiens
YTAATTRN
NYAATTAR
SELEX
Yin et al.(2017)
LMX1A_eDBD_Methyl-HT-SELEX_2
0.601
0.351
LMX1B
M05154_2.00
Homo sapiens
NNNBYAATTRN
NYAATTRVNNN
SELEX
Yin et al.(2017)
LMX1B_eDBD_Methyl-HT-SELEX_1
0.601
0.351
LMX1B
M05155_2.00
Homo sapiens
WTAAYGAR
YTCRTTAW
SELEX
Yin et al.(2017)
LMX1B_eDBD_Methyl-HT-SELEX_2
0.601
0.351
LMX1B
M05157_2.00
Homo sapiens
TTAACGAG
CTCGTTAA
SELEX
Yin et al.(2017)
LMX1B_FL_Methyl-HT-SELEX_1
0.601
0.351
LMX1B
M05158_2.00
Homo sapiens
NWWTTAATTAW
WTAATTAAWWN
SELEX
Yin et al.(2017)
LMX1B_FL_Methyl-HT-SELEX_2
0.601
0.351
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TMUE_s0046003700
Homeodomain
59
115
KRPRTVFSKEQVLILEKEFRKTQYLVGTERQRLSNLLGLTDQQVKVWFQNRRTKYRK
Links
Other
Homeodomain
family TFs
Other
Trichuris muris
TFs
3975 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy