TRE_0000860801 (Trichobilharzia regenti)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 TRE_0000860801 T237003_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Barhl1
M00433_2.00
Mus musculus
NTAAWNRNN

NNYNWTTAN
PBM
Berger et al.(2008)
Barhl1_2590
0.680 0.808
Barhl1
M03258_2.00
Mus musculus
NNTAAWYGNH

DNCRWTTANN
SELEX
Jolma et al.(2013)
Barhl1_1
0.680 0.808
Barhl1
M03259_2.00
Mus musculus
NNTAADNRNN

NNYNHTTANN
SELEX
Jolma et al.(2013)
Barhl1_2
0.680 0.808
Barhl1
M03260_2.00
Mus musculus
TAAWYGNYNNTAAWYG

CRWTTANNRNCRWTTA
SELEX
Jolma et al.(2013)
Barhl1_3
0.680 0.808
B-H2
M03810_2.00
Drosophila melanogaster
VNTAAAYGNH

DNCRTTTANB
SELEX
Nitta et al.(2015)
B-H2_1
0.680 0.808
B-H2
M03811_2.00
Drosophila melanogaster
SNTAADBGN

NCVHTTANS
SELEX
Nitta et al.(2015)
B-H2_2
0.680 0.808
BARHL1
M05091_2.00
Homo sapiens
NTAAWYGN

NCRWTTAN
SELEX
Yin et al.(2017)
BARHL1_eDBD_HT-SELEX_1
0.680 0.808
BARHL1
M05092_2.00
Homo sapiens
NTAADBGN

NCVHTTAN
SELEX
Yin et al.(2017)
BARHL1_eDBD_HT-SELEX_2
0.680 0.808
B-H2
M06503_2.00
Drosophila melanogaster
WTAATTG

CAATTAW
B1H
Mathelier et al.(2014)
MA0169.1
0.680 0.808
BARHL1
M05093_2.00
Homo sapiens
NTAADKGN

NCMHTTAN
SELEX
Yin et al.(2017)
BARHL1_eDBD_Methyl-HT-SELEX
0.680 0.808
Barhl2
M00460_2.00
Mus musculus
NTAAWNRNN

NNYNWTTAN
PBM
Berger et al.(2008)
Barhl2_3868
0.680 0.769
BARHL2
M03157_2.00
Homo sapiens
NNTAAWYGNN

NNCRWTTANN
SELEX
Jolma et al.(2013)
BARHL2_1
0.680 0.769
BARHL2
M03158_2.00
Homo sapiens
NNTAAWBGNN

NNCVWTTANN
SELEX
Jolma et al.(2013)
BARHL2_2
0.680 0.769
BARHL2
M03159_2.00
Homo sapiens
TAAWYGNNNNTAAWYR

YRWTTANNNNCRWTTA
SELEX
Jolma et al.(2013)
BARHL2_3
0.680 0.769
BARHL2
M03160_2.00
Homo sapiens
NNTAAWYGNH

DNCRWTTANN
SELEX
Jolma et al.(2013)
BARHL2_4
0.680 0.769
BARHL2
M03161_2.00
Homo sapiens
NNTAAWYGNN

NNCRWTTANN
SELEX
Jolma et al.(2013)
BARHL2_5
0.680 0.769
BARHL2
M03162_2.00
Homo sapiens
TAAWYGNYNHTAAWYG

CRWTTADNRNCRWTTA
SELEX
Jolma et al.(2013)
BARHL2_6
0.680 0.769
B-H1
M03829_2.00
Drosophila melanogaster
VNTAAWYGNN

NNCRWTTANB
SELEX
Nitta et al.(2015)
B-H1_1
0.680 0.769
B-H1
M03830_2.00
Drosophila melanogaster
SNTAADBGN

NCVHTTANS
SELEX
Nitta et al.(2015)
B-H1_2
0.680 0.769
BARHL2
M05164_2.00
Homo sapiens
HTAAAYGNY

RNCRTTTAD
SELEX
Yin et al.(2017)
BARHL2_eDBD_HT-SELEX_1
0.680 0.769
BARHL2
M05165_2.00
Homo sapiens
NTAAWTGNB

VNCAWTTAN
SELEX
Yin et al.(2017)
BARHL2_eDBD_HT-SELEX_2
0.680 0.769
BARHL2
M05167_2.00
Homo sapiens
NTAAWYGN

NCRWTTAN
SELEX
Yin et al.(2017)
BARHL2_FL_HT-SELEX_1
0.680 0.769
BARHL2
M05168_2.00
Homo sapiens
NTAAWYGN

NCRWTTAN
SELEX
Yin et al.(2017)
BARHL2_FL_HT-SELEX_2
0.680 0.769
B-H1
M06512_2.00
Drosophila melanogaster
HTAAWYG

CRWTTAD
B1H
Mathelier et al.(2014)
MA0168.1
0.680 0.769
BARHL2
M05166_2.00
Homo sapiens
NTAAWTGNB

VNCAWTTAN
SELEX
Yin et al.(2017)
BARHL2_eDBD_Methyl-HT-SELEX
0.680 0.769
BARHL2
M05169_2.00
Homo sapiens
NTAAWTGN

NCAWTTAN
SELEX
Yin et al.(2017)
BARHL2_FL_Methyl-HT-SELEX
0.680 0.769
ENSTNIG00000006040
M02106_2.00
Tetraodon nigroviridis
NNNBTAAWHRBNN

NNVYDWTTAVNNN
PBM
Weirauch et al.(2014)
pTH6503
0.676 0.731
Bsx
M00516_2.00
Mus musculus
NTAAYBDNN

NNHVRTTAN
PBM
Berger et al.(2008)
Bsx_3483
0.615 0.615
BSX
M03235_2.00
Homo sapiens
NTAATBRN

NYVATTAN
SELEX
Jolma et al.(2013)
BSX_1
0.615 0.615
BSX
M05377_2.00
Homo sapiens
NTAAYGHB

VDCRTTAN
SELEX
Yin et al.(2017)
BSX_eDBD_HT-SELEX_1
0.615 0.615
BSX
M05378_2.00
Homo sapiens
BTAATBRV

BYVATTAV
SELEX
Yin et al.(2017)
BSX_eDBD_HT-SELEX_2
0.615 0.615
BSX
M05379_2.00
Homo sapiens
NTAAYGHB

VDCRTTAN
SELEX
Yin et al.(2017)
BSX_eDBD_Methyl-HT-SELEX_1
0.615 0.615
BSX
M05380_2.00
Homo sapiens
NTAATKRN

NYMATTAN
SELEX
Yin et al.(2017)
BSX_eDBD_Methyl-HT-SELEX_2
0.615 0.615
bsh
M02113_2.00
Drosophila melanogaster
NNTAAYBDNN

NNHVRTTANN
PBM
Weirauch et al.(2014)
pTH6569
0.613 0.596
bsh
M03786_2.00
Drosophila melanogaster
TAATYTAATTA

TAATTARATTA
SELEX
Nitta et al.(2015)
bsh_1
0.613 0.596
bsh
M03787_2.00
Drosophila melanogaster
TAATTRVWTAATKR

YMATTAWBYAATTA
SELEX
Nitta et al.(2015)
bsh_2
0.613 0.596
bsh
M03788_2.00
Drosophila melanogaster
NTAATBRN

NYVATTAN
SELEX
Nitta et al.(2015)
bsh_3
0.613 0.596
bsh
M06483_2.00
Drosophila melanogaster
YTAATBR

YVATTAR
B1H
Mathelier et al.(2014)
MA0214.1
0.613 0.596
bsh
M06231_2.00
Drosophila melanogaster
HYTAATBRV

BYVATTARD
B1H
Zhu et al.(2011)
Bsh_Cell_FBgn0000529
0.613 0.596
bsh
M06232_2.00
Drosophila melanogaster
NTAATKR

YMATTAN
B1H
Zhu et al.(2011)
Bsh_SOLEXA_FBgn0000529
0.613 0.596
CG11085
M03857_2.00
Drosophila melanogaster
BTAAWYGN

NCRWTTAV
SELEX
Nitta et al.(2015)
CG11085_1
0.606 0.615
CG11085
M03858_2.00
Drosophila melanogaster
NTAAWCGN

NCGWTTAN
SELEX
Nitta et al.(2015)
CG11085_2
0.606 0.615
CG11085
M06532_2.00
Drosophila melanogaster
TTAATDG

CHATTAA
B1H
Mathelier et al.(2014)
MA0171.1
0.606 0.615
CG11085
M06339_2.00
Drosophila melanogaster
NTTAATDGV

BCHATTAAN
B1H
Zhu et al.(2011)
CG11085_Cell_FBgn0030408
0.606 0.615
CG11085
M06340_2.00
Drosophila melanogaster
NHTAAWBRNN

NNYVWTTADN
B1H
Zhu et al.(2011)
CG11085_SOLEXA_FBgn0030408
0.606 0.615
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TRE_0000860801-mRNA-1 Homeodomain 55 106

Links

Other Homeodomain family TFs
Other Trichobilharzia regenti TFs

638 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
A0A075Q982_PATMI Patiria miniata A0A075Q982_PATMI D 0.000
AAI66068 Xenopus tropicalis AAI66068 I 0.000
Alligator_sinensis_CCG012002.1 Alligator sinensis Alligator_sinensis_CCG012002.1 I 0.000
Alligator_sinensis_CCG014450.1 Alligator sinensis Alligator_sinensis_CCG014450.1 I 0.000
Brh_R007719 Buceros rhinoceros Brh_R007719 I 0.000
CapteG223644 Capitella teleta CapteG223644 I 0.000
CGI_10020437 Crassostrea gigas CGI_10020437 I 0.000
ENSAMEG00000004661 Ailuropoda melanoleuca ENSAMEG00000004661 I 0.000
ENSAMEG00000012360 Ailuropoda melanoleuca ENSAMEG00000012360 I 0.000
ENSAMEG00000012731 Ailuropoda melanoleuca ENSAMEG00000012731 I 0.000
ENSAMXG00000009990 Astyanax mexicanus ENSAMXG00000009990 I 0.000
ENSAMXG00000010492 Astyanax mexicanus ENSAMXG00000010492 I 0.000
ENSAMXG00000012247 Astyanax mexicanus ENSAMXG00000012247 I 0.000
ENSBTAP00000018875-D1 Bos grunniens ENSBTAP00000018875-D1 I 0.000
ENSCPOG00000005881 Cavia porcellus ENSCPOG00000005881 I 0.000
ENSCSAG00000002587 Chlorocebus sabaeus ENSCSAG00000002587 I 0.000
ENSCSAG00000009676 Chlorocebus sabaeus ENSCSAG00000009676 I 0.000
ENSCSAG00000015663 Chlorocebus sabaeus ENSCSAG00000015663 I 0.000
ENSECAG00000002502 Equus caballus ENSECAG00000002502 I 0.000
ENSFALG00000004466 Ficedula albicollis ENSFALG00000004466 I 0.000
ENSFALG00000009181 Ficedula albicollis ENSFALG00000009181 I 0.000
ENSGMOG00000002634 Gadus morhua ENSGMOG00000002634 I 0.000
ENSGMOG00000003675 Gadus morhua ENSGMOG00000003675 I 0.000
ENSGMOG00000014981 Gadus morhua ENSGMOG00000014981 I 0.000
ENSLACG00000003893 Latimeria chalumnae ENSLACG00000003893 I 0.000
ENSLACG00000016985 Latimeria chalumnae ENSLACG00000016985 I 0.000
ENSLOCG00000002398 Lepisosteus oculatus ENSLOCG00000002398 I 0.000
ENSLOCG00000008583 Lepisosteus oculatus ENSLOCG00000008583 I 0.000
ENSLOCG00000013335 Lepisosteus oculatus ENSLOCG00000013335 I 0.000
ENSMEUG00000014480 Macropus eugenii ENSMEUG00000014480 I 0.000
ENSMICG00000015729 Microcebus murinus ENSMICG00000015729 I 0.000
ENSMMUG00000001904 Macaca mulatta ENSMMUG00000001904 I 0.000
ENSMODG00000012526 Monodelphis domestica ENSMODG00000012526 I 0.000
ENSMPUG00000000551 Mustela putorius furo ENSMPUG00000000551 I 0.000
ENSMPUG00000011981 Mustela putorius furo ENSMPUG00000011981 I 0.000
ENSMPUG00000015272 Mustela putorius furo ENSMPUG00000015272 I 0.000
ENSNLEG00000001655 Nomascus leucogenys ENSNLEG00000001655 I 0.000
ENSNLEG00000002040 Nomascus leucogenys ENSNLEG00000002040 I 0.000
ENSNLEG00000004050 Nomascus leucogenys ENSNLEG00000004050 I 0.000
ENSOARG00000006620 Ovis aries ENSOARG00000006620 I 0.000
ENSOARG00000008340 Ovis aries ENSOARG00000008340 I 0.000
ENSOARG00000014467 Ovis aries ENSOARG00000014467 I 0.000
ENSOCUG00000000451 Oryctolagus cuniculus ENSOCUG00000000451 I 0.000
ENSONIG00000007180 Oreochromis niloticus ENSONIG00000007180 I 0.000
ENSONIG00000008933 Oreochromis niloticus ENSONIG00000008933 I 0.000
ENSONIG00000018223 Oreochromis niloticus ENSONIG00000018223 I 0.000
ENSONIG00000019678 Oreochromis niloticus ENSONIG00000019678 I 0.000
ENSP00000177694 Macaca fascicularis ENSP00000177694 I 0.000
ENSP00000374205 Macaca fascicularis ENSP00000374205 I 0.000
ENSP00000374205-D1 Bos grunniens ENSP00000374205-D1 I 0.000
ENSP00000388620 Macaca fascicularis ENSP00000388620 I 0.000
ENSP00000388620-D1 Bos grunniens ENSP00000388620-D1 I 0.000
ENSPANG00000011539 Papio anubis ENSPANG00000011539 I 0.000
ENSPANG00000018688 Papio anubis ENSPANG00000018688 I 0.000
ENSPFOG00000006471 Poecilia formosa ENSPFOG00000006471 I 0.000
ENSPFOG00000017461 Poecilia formosa ENSPFOG00000017461 I 0.000
ENSPFOG00000017938 Poecilia formosa ENSPFOG00000017938 I 0.000
ENSPFOG00000018019 Poecilia formosa ENSPFOG00000018019 I 0.000
ENSPMAG00000003985 Petromyzon marinus ENSPMAG00000003985 I 0.000
ENSPPYG00000008879 Pongo abelii ENSPPYG00000008879 I 0.000
ENSPPYG00000012882 Pongo abelii ENSPPYG00000012882 I 0.000
ENSPPYG00000014055 Pongo abelii ENSPPYG00000014055 I 0.000
ENSPSIG00000004373 Pelodiscus sinensis ENSPSIG00000004373 I 0.000
ENSPSIG00000005360 Pelodiscus sinensis ENSPSIG00000005360 I 0.000
ENSSHAG00000016616 Sarcophilus harrisii ENSSHAG00000016616 I 0.000
ENSSHAG00000017378 Sarcophilus harrisii ENSSHAG00000017378 I 0.000
ENSSHAG00000018315 Sarcophilus harrisii ENSSHAG00000018315 I 0.000
ENSSSCG00000011219 Sus scrofa ENSSSCG00000011219 I 0.000
ENSSSCG00000022626 Sus scrofa ENSSSCG00000022626 I 0.000
ENSSTOG00000001626 Ictidomys tridecemlineatus ENSSTOG00000001626 I 0.000
ENSSTOG00000020918 Ictidomys tridecemlineatus ENSSTOG00000020918 I 0.000
ENSSTOG00000023843 Ictidomys tridecemlineatus ENSSTOG00000023843 I 0.000
ENSVPAG00000002720 Vicugna pacos ENSVPAG00000002720 I 0.000
ENSXMAG00000000528 Xiphophorus maculatus ENSXMAG00000000528 I 0.000
ENSXMAG00000011427 Xiphophorus maculatus ENSXMAG00000011427 I 0.000
ENSXMAG00000013655 Xiphophorus maculatus ENSXMAG00000013655 I 0.000
ENSXMAG00000014284 Xiphophorus maculatus ENSXMAG00000014284 I 0.000
EOMES Bos taurus ENSBTAG00000016920 I 0.000
EOMES Pan troglodytes ENSPTRG00000014705 I 0.000
EOMES Canis familiaris ENSCAFG00000005510 I 0.000
EOMES Gorilla gorilla ENSGGOG00000008358 I 0.000
EOMES Homo sapiens ENSG00000163508 D 0.000
EOMES Procavia capensis ENSPCAG00000013650 I 0.000
EOMES Callithrix jacchus ENSCJAG00000004263 I 0.000
EOMES Myotis lucifugus ENSMLUG00000001462 I 0.000
Eomes Dipodomys ordii ENSDORG00000016346 I 0.000
EOMES Equus caballus ENSECAG00000021052 I 0.000
EOMES Felis catus ENSFCAG00000003602 I 0.000
EOMES Gallus gallus ENSGALG00000027247 I 0.000
EOMES Pteropus vampyrus ENSPVAG00000009999 I 0.000
EOMES Otolemur garnettii ENSOGAG00000030966 I 0.000
Eomes Mus musculus ENSMUSG00000032446 D 0.000
eomes Xenopus tropicalis XB-GENE-479769 I 0.000
EOMES Anolis carolinensis ENSACAG00000014201 I 0.000
EOMES Cavia porcellus ENSCPOG00000004381 I 0.000
EOMES Ornithorhynchus anatinus ENSOANG00000012619 I 0.000
EOMES Loxodonta africana ENSLAFG00000004142 I 0.000
EOMES Erinaceus europaeus ENSEEUG00000005958 I 0.000
eomes.L Xenopus laevis XB-GENE-865305 I 0.000
eomes.S Xenopus laevis XB-GENE-6487182 I 0.000
eomesa Gasterosteus aculeatus ENSGACG00000003160 I 0.000
eomesa Takifugu rubripes ENSTRUG00000005361 I 0.000
eomesa Oryzias latipes ENSORLG00000002320 I 0.000
eomesa Danio rerio ENSDARG00000006640 I 0.000
eomesa Tetraodon nigroviridis ENSTNIG00000017582 I 0.000
eomesb Tetraodon nigroviridis ENSTNIG00000019116 I 0.000
eomesb Takifugu rubripes ENSTRUG00000008966 I 0.000
eomesb Danio rerio ENSDARG00000104243 I 0.000
eomesb Gasterosteus aculeatus ENSGACG00000006345 I 0.000
eomesb Oryzias latipes ENSORLG00000005393 I 0.000
estExt_fgenesh2_kg.C_1840001 Branchiostoma floridae estExt_fgenesh2_kg.C_1840001 I 0.000
fgenesh2_pg.scaffold_55000054 Branchiostoma floridae fgenesh2_pg.scaffold_55000054 I 0.000
LotgiG129911 Lottia gigantea LotgiG129911 I 0.000
Myotis_brandtii_KPNB1_10030428 Myotis brandtii Myotis_brandtii_KPNB1_10030428 I 0.000
Myotis_brandtii_SLC4A10_10035570 Myotis brandtii Myotis_brandtii_SLC4A10_10035570 I 0.000
Ogr17175 Ophisaurus gracilis Ogr17175 I 0.000
Pvit_15940 Pogona vitticeps Pvit_15940 I 0.000
Pvit_16634 Pogona vitticeps Pvit_16634 I 0.000
Sakowv30002752m.g Saccoglossus kowalevskii Sakowv30002752m.g I 0.000
SPU_025584 Strongylocentrotus purpuratus SPU_025584 D 0.000
TBR1 Bos taurus ENSBTAG00000021692 I 0.000
TBR1 Callithrix jacchus ENSCJAG00000005603 I 0.000
tbr1 Xenopus tropicalis XB-GENE-942241 I 0.000
TBR1 Canis familiaris ENSCAFG00000009984 I 0.000
TBR1 Otolemur garnettii ENSOGAG00000004936 I 0.000
Tbr1 Rattus norvegicus ENSRNOG00000005049 I 0.000
TBR1 Pan troglodytes ENSPTRG00000012576 I 0.000
TBR1 Myotis lucifugus ENSMLUG00000006008 I 0.000
TBR1 Felis catus ENSFCAG00000025073 I 0.000
TBR1 Loxodonta africana ENSLAFG00000011541 I 0.000
TBR1 Oryctolagus cuniculus ENSOCUG00000005884 I 0.000
TBR1 Homo sapiens ENSG00000136535 D 0.000
TBR1 Ochotona princeps ENSOPRG00000005150 I 0.000
Tbr1 Mus musculus ENSMUSG00000035033 D 0.000
TBR1 Monodelphis domestica ENSMODG00000005353 I 0.000
TBR1 Dasypus novemcinctus ENSDNOG00000009816 I 0.000
TBR1 Macaca mulatta ENSMMUG00000011911 I 0.000
TBR1 Gorilla gorilla ENSGGOG00000015752 I 0.000
tbr1a Danio rerio ENSDARG00000076259 I 0.000
tbr1b Gasterosteus aculeatus ENSGACG00000005648 I 0.000
tbr1b Danio rerio ENSDARG00000004712 I 0.000
tbr1b Oryzias latipes ENSORLG00000016828 I 0.000
tbr1b Tetraodon nigroviridis ENSTNIG00000016497 I 0.000
tbr1b Takifugu rubripes ENSTRUG00000005183 I 0.000
tbx21 Xenopus tropicalis XB-GENE-479103 I 0.000
TBX21 Bos taurus ENSBTAG00000014199 I 0.000
tbx21 Danio rerio ENSDARG00000004473 I 0.000
TBX21 Macaca mulatta ENSMMUG00000007098 I 0.000
TBX21 Myotis lucifugus ENSMLUG00000014542 I 0.000
TBX21 Oryctolagus cuniculus ENSOCUG00000012907 I 0.000
Tbx21 Mus musculus ENSMUSG00000001444 D 0.000
TBX21 Otolemur garnettii ENSOGAG00000006160 I 0.000
TBX21 Gorilla gorilla ENSGGOG00000002208 I 0.000
TBX21 Sus scrofa ENSSSCG00000017517 I 0.000
tbx21 Takifugu rubripes ENSTRUG00000012995 I 0.000
Tbx21 Rattus norvegicus ENSRNOG00000009427 I 0.000
TBX21 Pteropus vampyrus ENSPVAG00000004921 I 0.000
TBX21 Pan troglodytes ENSPTRG00000009335 I 0.000
TBX21 Felis catus ENSFCAG00000010607 I 0.000
TBX21 Callithrix jacchus ENSCJAG00000007796 I 0.000
TBX21 Homo sapiens ENSG00000073861 D 0.000
TBX21 Cavia porcellus ENSCPOG00000026273 I 0.000
TBX21 Canis familiaris ENSCAFG00000016705 I 0.000
Tbx21 Dipodomys ordii ENSDORG00000013302 I 0.000
tbx21 Tetraodon nigroviridis ENSTNIG00000010103 I 0.000