GH22657 (Drosophila grimshawi)
Homeodomain,Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox)
PF00292 (PAX)
IPR001356
IPR001523
FBgn0130115 T237567_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
gsb
M03889_2.00
Drosophila melanogaster
RATTMGTCACGSN

NSCGTGACKAATY
SELEX
Nitta et al.(2015)
gsb_1
0.989 0.989
gsb
M03890_2.00
Drosophila melanogaster
NNNAATCRATTWNN

NNWAATYGATTNNN
SELEX
Nitta et al.(2015)
gsb_2
0.989 0.989
gsb
M03891_2.00
Drosophila melanogaster
RTBDMTAATTGATTD

HAATCAATTAKHVAY
SELEX
Nitta et al.(2015)
gsb_3
0.989 0.989
gsb
M03892_2.00
Drosophila melanogaster
NNTAATYGATTANN

NNTAATCRATTANN
SELEX
Nitta et al.(2015)
gsb_4
0.989 0.989
gsb
M03893_2.00
Drosophila melanogaster
NSCGTGACKAATBV

BVATTMGTCACGSN
SELEX
Nitta et al.(2015)
gsb_5
0.989 0.989
prd
M03894_2.00
Drosophila melanogaster
VATTVGTCACGS

SCGTGACBAATB
SELEX
Nitta et al.(2015)
prd_1
0.819 0.819
prd
M03895_2.00
Drosophila melanogaster
NRATCRATYN

NRATYGATYN
SELEX
Nitta et al.(2015)
prd_2
0.819 0.819
prd
M06555_2.00
Drosophila melanogaster
HSWAACNGH

DCNGTTWSD
B1H
Mathelier et al.(2014)
MA0239.1
0.819 0.819
prd
M09684_2.00
Drosophila melanogaster
HMVNTHHKWMACGS

SCGTKWMDDANBKD
Misc
Kulakovskiy et al.(2009)
prd
0.819 0.819
prd
M10818_2.00
Drosophila melanogaster Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$PRD_Q6
0.819 0.819
gsb-n
M03888_2.00
Drosophila melanogaster
SCGTRWCKAATB

VATTMGWYACGS
SELEX
Nitta et al.(2015)
gsb-n_1
0.808 0.808
Pax7
M00541_2.00
Mus musculus
NNVATTWN

NWAATBNN
PBM
Berger et al.(2008)
Pax7_3783
0.775 0.775
PAX7
M03292_2.00
Homo sapiens
WAATYRATTA

TAATYRATTW
SELEX
Jolma et al.(2013)
PAX7_1
0.775 0.775
PAX7
M03293_2.00
Homo sapiens
TAATYGATTA

TAATCRATTA
SELEX
Jolma et al.(2013)
PAX7_2
0.775 0.775
PAX7
M05416_2.00
Homo sapiens
NDSCGTGACGAATYR

YRATTCGTCACGSHN
SELEX
Yin et al.(2017)
PAX7_eDBD_HT-SELEX_1
0.775 0.775
PAX7
M05417_2.00
Homo sapiens
NSGTCACGSHWRTTAN

NTAAYWDSCGTGACSN
SELEX
Yin et al.(2017)
PAX7_eDBD_HT-SELEX_2
0.775 0.775
PAX7
M05418_2.00
Homo sapiens
NNAATCRATTWN

NWAATYGATTNN
SELEX
Yin et al.(2017)
PAX7_eDBD_HT-SELEX_3
0.775 0.775
PAX7
M05422_2.00
Homo sapiens
BVATTMGTCACGSHN

NDSCGTGACKAATBV
SELEX
Yin et al.(2017)
PAX7_FL_HT-SELEX_1
0.775 0.775
PAX7
M05423_2.00
Homo sapiens
NSGTCACGSYWATTAN

NTAATWRSCGTGACSN
SELEX
Yin et al.(2017)
PAX7_FL_HT-SELEX_2
0.775 0.775
PAX7
M05424_2.00
Homo sapiens
NTAATYGATTAN

NTAATCRATTAN
SELEX
Yin et al.(2017)
PAX7_FL_HT-SELEX_3
0.775 0.775
PAX7
M05874_2.00
Homo sapiens
ATTMGTYACGSHN

NDSCGTRACKAAT
SMiLE-seq
Isakova et al.(2017)
PAX7
0.775 0.775
Pax7
M09586_2.00
Mus musculus
NNNNNYAATTDNNHAATTAN

NTAATTDNNHAATTRNNNNN
Misc
Heinz et al.(2010)
Myoblast-Pax7_GSE25064_1
0.775 0.775
Pax7
M09587_2.00
Mus musculus
DTAATYDGATTA

TAATCHRATTAH
Misc
Heinz et al.(2010)
Myoblast-Pax7_GSE25064_2
0.775 0.775
Pax7
M09588_2.00
Mus musculus
TAATTGATTW

WAATCAATTA
Misc
Heinz et al.(2010)
Myoblast-Pax7_GSE25064_3
0.775 0.775
PAX7
M05419_2.00
Homo sapiens
NVATTVGTCRCGSYN

NRSCGYGACBAATBN
SELEX
Yin et al.(2017)
PAX7_eDBD_Methyl-HT-SELEX_1
0.775 0.775
PAX7
M05420_2.00
Homo sapiens
NNGTCACGSHHRTTAN

NTAAYDDSCGTGACNN
SELEX
Yin et al.(2017)
PAX7_eDBD_Methyl-HT-SELEX_2
0.775 0.775
PAX7
M05421_2.00
Homo sapiens
NNAATCRATTWN

NWAATYGATTNN
SELEX
Yin et al.(2017)
PAX7_eDBD_Methyl-HT-SELEX_3
0.775 0.775
PAX7
M05425_2.00
Homo sapiens
YRATTMGTCACGSHN

NDSCGTGACKAATYR
SELEX
Yin et al.(2017)
PAX7_FL_Methyl-HT-SELEX_1
0.775 0.775
PAX7
M05426_2.00
Homo sapiens
NSGTCACGSYWATTAN

NTAATWRSCGTGACSN
SELEX
Yin et al.(2017)
PAX7_FL_Methyl-HT-SELEX_2
0.775 0.775
PAX7
M05427_2.00
Homo sapiens
NTAATYGATTAN

NTAATCRATTAN
SELEX
Yin et al.(2017)
PAX7_FL_Methyl-HT-SELEX_3
0.775 0.775
PAX3
M00358_2.00
Homo sapiens
NRTNNNN

NNNNAYN
PBM
Barrera et al.(2016)
PAX3_REF
0.764 0.764
PAX3
M03297_2.00
Homo sapiens
TAATYRATTA

TAATYRATTA
SELEX
Jolma et al.(2013)
PAX3_1
0.764 0.764
PAX3
M03885_2.00
Homo sapiens
NNTAATYGATTANN

NNTAATCRATTANN
SELEX
Nitta et al.(2015)
PAX3_1
0.764 0.764
PAX3
M03886_2.00
Homo sapiens
RATTMGTCACGST

ASCGTGACKAATY
SELEX
Nitta et al.(2015)
PAX3_2
0.764 0.764
PAX3
M05438_2.00
Homo sapiens
NSGTCACGSHHATTAN

NTAATDDSCGTGACSN
SELEX
Yin et al.(2017)
PAX3_eDBD_HT-SELEX_1
0.764 0.764
PAX3
M05439_2.00
Homo sapiens
NDAATCRATTMN

NKAATYGATTHN
SELEX
Yin et al.(2017)
PAX3_eDBD_HT-SELEX_2
0.764 0.764
PAX3
M05440_2.00
Homo sapiens
NBRATTMGTCACGSHN

NDSCGTGACKAATYVN
SELEX
Yin et al.(2017)
PAX3_eDBD_HT-SELEX_3
0.764 0.764
PAX3
M09585_2.00
Homo sapiens
WSYRTGACWAATBNN

NNVATTWGTCAYRSW
Misc
Heinz et al.(2010)
Rh4-PAX3_FKHR_GSE19063
0.764 0.764
PAX3
M10816_2.00
Homo sapiens
TCGTCACRCHYHM

KDRDGYGTGACGA
Transfac
Matys et al.(2006)
V$PAX3_01
0.764 0.764
PAX3
M10817_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX3_B
0.764 0.764
PAX3
M00359_2.00
Homo sapiens
NTAATYRV

BYRATTAN
PBM
Barrera et al.(2016)
PAX3_Y90H
0.764 0.764
PAX3
M05441_2.00
Homo sapiens
NNGTCACGSHWRTTAN

NTAAYWDSCGTGACNN
SELEX
Yin et al.(2017)
PAX3_eDBD_Methyl-HT-SELEX_1
0.764 0.764
PAX3
M05442_2.00
Homo sapiens
NWAATCRATTAN

NTAATYGATTWN
SELEX
Yin et al.(2017)
PAX3_eDBD_Methyl-HT-SELEX_2
0.764 0.764
PAX3
M05443_2.00
Homo sapiens
NNRATTVGTCRCGSHN

NDSCGYGACBAATYNN
SELEX
Yin et al.(2017)
PAX3_eDBD_Methyl-HT-SELEX_3
0.764 0.764
PAX3
M00352_2.00
Homo sapiens
VNTAATYR

YRATTANB
PBM
Barrera et al.(2016)
PAX3_G48R
0.758 0.758
PAX3
M00353_2.00
Homo sapiens
NNNNRTNNN

NNNAYNNNN
PBM
Barrera et al.(2016)
PAX3_N47H
0.758 0.758
PAX3
M00354_2.00
Homo sapiens
NNNRYNN

NNRYNNN
PBM
Barrera et al.(2016)
PAX3_N47K
0.758 0.758
PAX3
M00355_2.00
Homo sapiens
NNNATNWNN

NNWNATNNN
PBM
Barrera et al.(2016)
PAX3_P50L
0.758 0.758
PAX3
M00356_2.00
Homo sapiens
NNKWCAYDDWN

NWHHRTGWMNN
PBM
Barrera et al.(2016)
PAX3_R270C
0.758 0.758
PAX3
M00357_2.00
Homo sapiens
NNNATNWNN

NNWNATNNN
PBM
Barrera et al.(2016)
PAX3_R56L
0.758 0.758
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0156563 Paired box 19 143
FBpp0156563 Homeodomain 193 249

Links

Other Homeodomain,Paired box family TFs
Other Drosophila grimshawi TFs

233 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CJA38940 Caenorhabditis japonica CJA38940 N 0.000
CJA37630 Caenorhabditis japonica CJA37630 N 0.000
CJA37476 Caenorhabditis japonica CJA37476 N 0.000
CJA37149 Caenorhabditis japonica CJA37149 N 0.000
CJA37126 Caenorhabditis japonica CJA37126 N 0.000
CJA36978 Caenorhabditis japonica CJA36978 N 0.000
CJA36857 Caenorhabditis japonica CJA36857 N 0.000
CJA36855 Caenorhabditis japonica CJA36855 N 0.000
CJA36850 Caenorhabditis japonica CJA36850 N 0.000
CJA37676 Caenorhabditis japonica CJA37676 N 0.000
CJA37962 Caenorhabditis japonica CJA37962 N 0.000
CJA38934 Caenorhabditis japonica CJA38934 N 0.000
CJA38824 Caenorhabditis japonica CJA38824 N 0.000
CJA38513 Caenorhabditis japonica CJA38513 N 0.000
CJA38417 Caenorhabditis japonica CJA38417 N 0.000
CJA38371 Caenorhabditis japonica CJA38371 N 0.000
CJA38161 Caenorhabditis japonica CJA38161 N 0.000
CJA38131 Caenorhabditis japonica CJA38131 N 0.000
CJA38122 Caenorhabditis japonica CJA38122 N 0.000
CJA36771 Caenorhabditis japonica CJA36771 N 0.000
CJA36681 Caenorhabditis japonica CJA36681 N 0.000
CJA36536 Caenorhabditis japonica CJA36536 N 0.000
CJA35832 Caenorhabditis japonica CJA35832 N 0.000
CJA35247 Caenorhabditis japonica CJA35247 N 0.000
CJA35057 Caenorhabditis japonica CJA35057 N 0.000
CJA35049 Caenorhabditis japonica CJA35049 N 0.000
CJA34990 Caenorhabditis japonica CJA34990 N 0.000
CJA34945 Caenorhabditis japonica CJA34945 N 0.000
CJA34889 Caenorhabditis japonica CJA34889 N 0.000
CJA34808 Caenorhabditis japonica CJA34808 N 0.000
CJA35897 Caenorhabditis japonica CJA35897 N 0.000
CJA35914 Caenorhabditis japonica CJA35914 N 0.000
CJA36411 Caenorhabditis japonica CJA36411 N 0.000
CJA36099 Caenorhabditis japonica CJA36099 N 0.000
CJA36035 Caenorhabditis japonica CJA36035 N 0.000
CJA36030 Caenorhabditis japonica CJA36030 N 0.000
CJA35993 Caenorhabditis japonica CJA35993 N 0.000
CJA35992 Caenorhabditis japonica CJA35992 N 0.000
CJA35933 Caenorhabditis japonica CJA35933 N 0.000
CJA35928 Caenorhabditis japonica CJA35928 N 0.000
CJA34672 Caenorhabditis japonica CJA34672 N 0.000
CJA43218 Caenorhabditis japonica CJA43218 N 0.000
CJA41932 Caenorhabditis japonica CJA41932 N 0.000
CJA41694 Caenorhabditis japonica CJA41694 N 0.000
CJA41662 Caenorhabditis japonica CJA41662 N 0.000
CJA41556 Caenorhabditis japonica CJA41556 N 0.000
CJA41552 Caenorhabditis japonica CJA41552 N 0.000
CJA41207 Caenorhabditis japonica CJA41207 N 0.000
CJA41154 Caenorhabditis japonica CJA41154 N 0.000
CJA41048 Caenorhabditis japonica CJA41048 N 0.000
CJA42032 Caenorhabditis japonica CJA42032 N 0.000
CJA42199 Caenorhabditis japonica CJA42199 N 0.000
CJA43076 Caenorhabditis japonica CJA43076 N 0.000
CJA43071 Caenorhabditis japonica CJA43071 N 0.000
CJA43027 Caenorhabditis japonica CJA43027 N 0.000
CJA42880 Caenorhabditis japonica CJA42880 N 0.000
CJA42856 Caenorhabditis japonica CJA42856 N 0.000
CJA42394 Caenorhabditis japonica CJA42394 N 0.000
CJA42323 Caenorhabditis japonica CJA42323 N 0.000
CJA42235 Caenorhabditis japonica CJA42235 N 0.000
CJA40904 Caenorhabditis japonica CJA40904 N 0.000
CJA40752 Caenorhabditis japonica CJA40752 N 0.000
CJA40694 Caenorhabditis japonica CJA40694 N 0.000
CJA39630 Caenorhabditis japonica CJA39630 N 0.000
CJA39627 Caenorhabditis japonica CJA39627 N 0.000
CJA39602 Caenorhabditis japonica CJA39602 N 0.000
CJA39508 Caenorhabditis japonica CJA39508 N 0.000
CJA39357 Caenorhabditis japonica CJA39357 N 0.000
CJA39242 Caenorhabditis japonica CJA39242 N 0.000
CJA39167 Caenorhabditis japonica CJA39167 N 0.000
CJA39135 Caenorhabditis japonica CJA39135 N 0.000
CJA39760 Caenorhabditis japonica CJA39760 N 0.000
CJA39812 Caenorhabditis japonica CJA39812 N 0.000
CJA40556 Caenorhabditis japonica CJA40556 N 0.000
CJA40503 Caenorhabditis japonica CJA40503 N 0.000
CJA40419 Caenorhabditis japonica CJA40419 N 0.000
CJA40405 Caenorhabditis japonica CJA40405 N 0.000
CJA40346 Caenorhabditis japonica CJA40346 N 0.000
CJA40300 Caenorhabditis japonica CJA40300 N 0.000
CJA40132 Caenorhabditis japonica CJA40132 N 0.000
CJA39994 Caenorhabditis japonica CJA39994 N 0.000
CJA39094 Caenorhabditis japonica CJA39094 N 0.000
CJA28229 Caenorhabditis japonica CJA28229 N 0.000
CJA21062 Caenorhabditis japonica CJA21062 N 0.000
CJA18123 Caenorhabditis japonica CJA18123 N 0.000
CJA16335 Caenorhabditis japonica CJA16335 N 0.000
CJA13741 Caenorhabditis japonica CJA13741 N 0.000
CJA12586 Caenorhabditis japonica CJA12586 N 0.000
CJA11720 Caenorhabditis japonica CJA11720 N 0.000
CJA10237 Caenorhabditis japonica CJA10237 N 0.000
CJA09380 Caenorhabditis japonica CJA09380 N 0.000
CJA21479 Caenorhabditis japonica CJA21479 N 0.000
CJA21617 Caenorhabditis japonica CJA21617 N 0.000
CJA27756 Caenorhabditis japonica CJA27756 N 0.000
CJA26527 Caenorhabditis japonica CJA26527 N 0.000
CJA23952 Caenorhabditis japonica CJA23952 N 0.000
CJA23911 Caenorhabditis japonica CJA23911 N 0.000
CJA23565 Caenorhabditis japonica CJA23565 N 0.000
CJA22727 Caenorhabditis japonica CJA22727 N 0.000
CJA22385 Caenorhabditis japonica CJA22385 N 0.000
CJA22378 Caenorhabditis japonica CJA22378 N 0.000
CJA08447 Caenorhabditis japonica CJA08447 N 0.000
CJA07631 Caenorhabditis japonica CJA07631 N 0.000
CJA07083 Caenorhabditis japonica CJA07083 N 0.000
CBG27598 Caenorhabditis briggsae CBG27598 N 0.000
CBG25835 Caenorhabditis briggsae CBG25835 N 0.000
CBG25534 Caenorhabditis briggsae CBG25534 N 0.000
CBG24221 Caenorhabditis briggsae CBG24221 N 0.000
CBG18400 Caenorhabditis briggsae CBG18400 N 0.000
CBG12887 Caenorhabditis briggsae CBG12887 N 0.000
CBG10260 Caenorhabditis briggsae CBG10260 N 0.000
CBG06875 Caenorhabditis briggsae CBG06875 N 0.000
CJA00222 Caenorhabditis japonica CJA00222 N 0.000
CJA01033 Caenorhabditis japonica CJA01033 N 0.000
CJA06389 Caenorhabditis japonica CJA06389 N 0.000
CJA05858 Caenorhabditis japonica CJA05858 N 0.000
CJA05743 Caenorhabditis japonica CJA05743 N 0.000
CJA04206 Caenorhabditis japonica CJA04206 N 0.000
CJA04046 Caenorhabditis japonica CJA04046 N 0.000
CJA03346 Caenorhabditis japonica CJA03346 N 0.000
CJA02629 Caenorhabditis japonica CJA02629 N 0.000
CJA01220 Caenorhabditis japonica CJA01220 N 0.000
CBG05734 Caenorhabditis briggsae CBG05734 N 0.000
CJA34521 Caenorhabditis japonica CJA34521 N 0.000
CJA33630 Caenorhabditis japonica CJA33630 N 0.000
CJA33459 Caenorhabditis japonica CJA33459 N 0.000
CJA33458 Caenorhabditis japonica CJA33458 N 0.000
CJA33353 Caenorhabditis japonica CJA33353 N 0.000
CJA33310 Caenorhabditis japonica CJA33310 N 0.000
CJA33264 Caenorhabditis japonica CJA33264 N 0.000
CJA33161 Caenorhabditis japonica CJA33161 N 0.000
CJA33003 Caenorhabditis japonica CJA33003 N 0.000
CJA33658 Caenorhabditis japonica CJA33658 N 0.000
CJA33671 Caenorhabditis japonica CJA33671 N 0.000
CJA34486 Caenorhabditis japonica CJA34486 N 0.000
CJA34427 Caenorhabditis japonica CJA34427 N 0.000
CJA34410 Caenorhabditis japonica CJA34410 N 0.000
CJA34355 Caenorhabditis japonica CJA34355 N 0.000
CJA34132 Caenorhabditis japonica CJA34132 N 0.000
CJA34115 Caenorhabditis japonica CJA34115 N 0.000
CJA33928 Caenorhabditis japonica CJA33928 N 0.000
CJA33878 Caenorhabditis japonica CJA33878 N 0.000
CJA32767 Caenorhabditis japonica CJA32767 N 0.000
CJA32765 Caenorhabditis japonica CJA32765 N 0.000
CJA32698 Caenorhabditis japonica CJA32698 N 0.000
CJA31057 Caenorhabditis japonica CJA31057 N 0.000
CJA31027 Caenorhabditis japonica CJA31027 N 0.000
CJA30990 Caenorhabditis japonica CJA30990 N 0.000
CJA30895 Caenorhabditis japonica CJA30895 N 0.000
CJA30706 Caenorhabditis japonica CJA30706 N 0.000
CJA29131 Caenorhabditis japonica CJA29131 N 0.000
CJA28968 Caenorhabditis japonica CJA28968 N 0.000
CJA28704 Caenorhabditis japonica CJA28704 N 0.000
CJA31077 Caenorhabditis japonica CJA31077 N 0.000
CJA31121 Caenorhabditis japonica CJA31121 N 0.000
CJA32590 Caenorhabditis japonica CJA32590 N 0.000
CJA32546 Caenorhabditis japonica CJA32546 N 0.000
CJA32265 Caenorhabditis japonica CJA32265 N 0.000
CJA32188 Caenorhabditis japonica CJA32188 N 0.000
CJA32178 Caenorhabditis japonica CJA32178 N 0.000
CJA31775 Caenorhabditis japonica CJA31775 N 0.000
CJA31183 Caenorhabditis japonica CJA31183 N 0.000
CJA31180 Caenorhabditis japonica CJA31180 N 0.000
CJA28613 Caenorhabditis japonica CJA28613 N 0.000