Aan_R010823 (Calypte anna)
Homeodomain,Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox)
PF00292 (PAX) 		IPR001356
IPR001523 		Aan_R010823 T237685_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PAX3
M00358_2.00 		Homo sapiens
NRTNNNN
NNNNAYN		 PBM
Barrera et al.(2016)
PAX3_REF 		0.727 0.727
PAX3
M03297_2.00 		Homo sapiens
TAATYRATTA
TAATYRATTA		 SELEX
Jolma et al.(2013)
PAX3_1 		0.727 0.727
PAX3
M03885_2.00 		Homo sapiens
NNTAATYGATTANN
NNTAATCRATTANN		 SELEX
Nitta et al.(2015)
PAX3_1 		0.727 0.727
PAX3
M03886_2.00 		Homo sapiens
RATTMGTCACGST
ASCGTGACKAATY		 SELEX
Nitta et al.(2015)
PAX3_2 		0.727 0.727
PAX3
M05438_2.00 		Homo sapiens
NSGTCACGSHHATTAN
NTAATDDSCGTGACSN		 SELEX
Yin et al.(2017)
PAX3_eDBD_HT-SELEX_1 		0.727 0.727
PAX3
M05439_2.00 		Homo sapiens
NDAATCRATTMN
NKAATYGATTHN		 SELEX
Yin et al.(2017)
PAX3_eDBD_HT-SELEX_2 		0.727 0.727
PAX3
M05440_2.00 		Homo sapiens
NBRATTMGTCACGSHN
NDSCGTGACKAATYVN		 SELEX
Yin et al.(2017)
PAX3_eDBD_HT-SELEX_3 		0.727 0.727
PAX3
M09585_2.00 		Homo sapiens
WSYRTGACWAATBNN
NNVATTWGTCAYRSW		 Misc
Heinz et al.(2010)
Rh4-PAX3_FKHR_GSE19063 		0.727 0.727
PAX3
M10816_2.00 		Homo sapiens
TCGTCACRCHYHM
KDRDGYGTGACGA		 Transfac
Matys et al.(2006)
V$PAX3_01 		0.727 0.727
PAX3
M10817_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX3_B 		0.727 0.727
PAX3
M00352_2.00 		Homo sapiens
VNTAATYR
YRATTANB		 PBM
Barrera et al.(2016)
PAX3_G48R 		0.727 0.727
PAX3
M00353_2.00 		Homo sapiens
NNNNRTNNN
NNNAYNNNN		 PBM
Barrera et al.(2016)
PAX3_N47H 		0.727 0.727
PAX3
M00354_2.00 		Homo sapiens
NNNRYNN
NNRYNNN		 PBM
Barrera et al.(2016)
PAX3_N47K 		0.727 0.727
PAX3
M00355_2.00 		Homo sapiens
NNNATNWNN
NNWNATNNN		 PBM
Barrera et al.(2016)
PAX3_P50L 		0.727 0.727
PAX3
M00357_2.00 		Homo sapiens
NNNATNWNN
NNWNATNNN		 PBM
Barrera et al.(2016)
PAX3_R56L 		0.727 0.727
PAX3
M00359_2.00 		Homo sapiens
NTAATYRV
BYRATTAN		 PBM
Barrera et al.(2016)
PAX3_Y90H 		0.727 0.727
PAX3
M05441_2.00 		Homo sapiens
NNGTCACGSHWRTTAN
NTAAYWDSCGTGACNN		 SELEX
Yin et al.(2017)
PAX3_eDBD_Methyl-HT-SELEX_1 		0.727 0.727
PAX3
M05442_2.00 		Homo sapiens
NWAATCRATTAN
NTAATYGATTWN		 SELEX
Yin et al.(2017)
PAX3_eDBD_Methyl-HT-SELEX_2 		0.727 0.727
PAX3
M05443_2.00 		Homo sapiens
NNRATTVGTCRCGSHN
NDSCGYGACBAATYNN		 SELEX
Yin et al.(2017)
PAX3_eDBD_Methyl-HT-SELEX_3 		0.727 0.727
PAX3
M00356_2.00 		Homo sapiens
NNKWCAYDDWN
NWHHRTGWMNN		 PBM
Barrera et al.(2016)
PAX3_R270C 		0.720 0.720
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Aan_R010823 Paired box 9 41
Aan_R010823 Paired box 55 115
Aan_R010823 Homeodomain 174 230

Links

Other Homeodomain,Paired box family TFs
Other Calypte anna TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PAX3 Anolis carolinensis ENSACAG00000004981 I 0.740
ENSPSIG00000005535 Pelodiscus sinensis ENSPSIG00000005535 I 0.740
Pvit_18803 Pogona vitticeps Pvit_18803 I 0.740
PAX3 Ornithorhynchus anatinus ENSOANG00000007096 I 0.733
ENSFALG00000006722 Ficedula albicollis ENSFALG00000006722 I 0.733
PAX3 Taeniopygia guttata ENSTGUG00000007761 I 0.733
ENSOARG00000020289 Ovis aries ENSOARG00000020289 I 0.727
PAX3 Otolemur garnettii ENSOGAG00000001304 I 0.727
PAX3 Oryctolagus cuniculus ENSOCUG00000017507 I 0.727
ENSNLEG00000009611 Nomascus leucogenys ENSNLEG00000009611 I 0.727
ENSBTAP00000013131-D1 Bos grunniens ENSBTAP00000013131-D1 I 0.727
Pax3 Mus musculus ENSMUSG00000004872 I 0.727
ENSPANG00000008818 Papio anubis ENSPANG00000008818 I 0.727
PAX3 Procavia capensis ENSPCAG00000000403 I 0.727
Pax3 Rattus norvegicus ENSRNOG00000013670 I 0.727
ENSSHAG00000016542 Sarcophilus harrisii ENSSHAG00000016542 I 0.727
ENSSTOG00000008650 Ictidomys tridecemlineatus ENSSTOG00000008650 I 0.727
PAX3 Pan troglodytes ENSPTRG00000012969 I 0.727
PAX3 Monodelphis domestica ENSMODG00000021190 I 0.727
ENSPPYG00000013219 Pongo abelii ENSPPYG00000013219 I 0.727
ENSP00000375921 Macaca fascicularis ENSP00000375921 I 0.727
PAX3 Tupaia belangeri ENSTBEG00000010268 I 0.727
ENSMPUG00000016673 Mustela putorius furo ENSMPUG00000016673 I 0.727
PAX3 Macaca mulatta ENSMMUG00000020409 I 0.727
PAX3 Equus caballus ENSECAG00000014549 I 0.727
PAX3 Erinaceus europaeus ENSEEUG00000012346 I 0.727
PAX3 Bos taurus ENSBTAG00000009950 I 0.727
ENSCSAG00000007841 Chlorocebus sabaeus ENSCSAG00000007841 I 0.727
PAX3 Callithrix jacchus ENSCJAG00000012088 I 0.727
PAX3 Cavia porcellus ENSCPOG00000006276 I 0.727
PAX3 Felis catus ENSFCAG00000018967 I 0.727
PAX3 Homo sapiens ENSG00000135903 D 0.727
ENSAMEG00000007444 Ailuropoda melanoleuca ENSAMEG00000007444 I 0.727
ENSMEUG00000013628 Macropus eugenii ENSMEUG00000013628 I 0.727
PAX3 Microcebus murinus ENSMICG00000000336 I 0.727
PAX3 Canis familiaris ENSCAFG00000016041 I 0.727
PAX3 Loxodonta africana ENSLAFG00000008041 I 0.727
PAX3 Gorilla gorilla ENSGGOG00000015636 I 0.727
ENSLACG00000006342 Latimeria chalumnae ENSLACG00000006342 I 0.727
PAX3 Myotis lucifugus ENSMLUG00000014155 I 0.727
PAX3 Dasypus novemcinctus ENSDNOG00000001871 I 0.720
PAX3 Pteropus vampyrus ENSPVAG00000007498 I 0.713
ENSLOCG00000004189 Lepisosteus oculatus ENSLOCG00000004189 I 0.713
pax3a Danio rerio ENSDARG00000010192 I 0.707
Brh_R006623 Buceros rhinoceros Brh_R006623 I 0.707
pax3.S Xenopus laevis XB-GENE-482744 I 0.707
PAX3 Tetraodon nigroviridis ENSTNIG00000014313 I 0.700
PAX3 Takifugu rubripes ENSTRUG00000009198 I 0.700