CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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pou6f2
(
Danio rerio
)
Homeodomain,POU
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
PF00157 (Pou)
IPR001356
IPR000327
ENSDARG00000086362
T238118_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Enables sequence-specific DNA binding activity. Acts upstream of or within regeneration. Predicted to be located in nucleus. Human ortholog(s) of this gene implicated in nephroblastoma. Orthologous to human POU6F2 (POU class 6 homeobox 2). [provided by Alliance of Genome Resources, Apr 2022]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000105952
POU
186
236
VNLEEIREFAKAFKIRRLSLGLTQTQVGQALSATEGPAYSQSAICRHTILR
ENSDARP00000105952
POU
255
293
TGKLNPGLLYPARFEKLDITPKSAQKIKPVLERWMAEAE
ENSDARP00000105952
Homeodomain
315
371
RKRRTSFTPQALEILNSHFEKNTHPSGQEMTEIAEKLNYDREVVRVWFCNKRQALKN
ENSDARP00000120553
POU
481
531
VNLEEIREFAKAFKIRRLSLGLTQTQVGQALSATEGPAYSQSAICRHTILR
ENSDARP00000120553
POU
554
588
NPGLLYPARFEKLDITPKSAQKIKPVLERWMAEAE
ENSDARP00000120553
Homeodomain
610
666
RKRRTSFTPQALEILNSHFEKNTHPSGQEMTEIAEKLNYDREVVRVWFCNKRQALKN
Links
Other
Homeodomain,POU
family TFs
Other
Danio rerio
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMXG00000002856
Astyanax mexicanus
ENSAMXG00000002856
N
1.000