CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pou1f1
(
Mus musculus
)
Homeodomain,POU
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
PF00157 (Pou)
IPR001356
IPR000327
ENSMUSG00000004842
T238373_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Pou1f1
M00543_2.00
Mus musculus
NWWATKHNN
NNDMATWWN
PBM
Berger et al.(2008)
Pou1f1_3818
(Direct)
(Direct)
Pou1f1
M00801_2.00
Mus musculus
NWWATKMDNN
NNHKMATWWN
PBM
Weirauch et al.(2013)
pTH3818
(Direct)
(Direct)
Pou1f1
M00802_2.00
Mus musculus
NWWATKMRNN
NNYKMATWWN
PBM
Weirauch et al.(2013)
pTH4326
(Direct)
(Direct)
Pou1f1
M02238_2.00
Mus musculus
NTAATKHNN
NNDMATTAN
PBM
Weirauch et al.(2014)
pTH6507
(Direct)
(Direct)
Pou1f1
M09223_2.00
Mus musculus
YWMWTGNAWAWWN
NWWTWTNCAWKWR
Misc
Kulakovskiy et al.(2013)
PIT1_MOUSE.H11MO.0.C
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.993
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M00543_2.00
POU
19
90
PEIRELEQFANEFKVRRIKLGYTQTNVGEALAAVHGSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAE
M00543_2.00
Homeodomain
107
163
RKRRTTISVAAKDALERHFGEHSKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKR
M00801_2.00
POU
19
90
PEIRELEQFANEFKVRRIKLGYTQTNVGEALAAVHGSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAE
M00801_2.00
Homeodomain
107
163
RKRRTTISVAAKDALERHFGEHSKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKR
M00802_2.00
POU
4
74
PEIRELEQFANEFKVRRIKLGYTQTNVGEALAAVHGSEFSQTTICRFENLQLSKNACKLKAILSKWLEEAE
M00802_2.00
Homeodomain
91
146
RKRRTTISVAAKDALERHFGEHSKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREK
M02238_2.00
Homeodomain
1
57
RKRRTTISVAAKDALERHFGEHSKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKR
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMUSP00000004964
POU
153
224
PEIRELEQFANEFKVRRIKLGYTQTNVGEALAAVHGSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAE
ENSMUSP00000004964
Homeodomain
241
297
RKRRTTISVAAKDALERHFGEHSKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKR
ENSMUSP00000135113
POU
127
198
PEIRELEQFANEFKVRRIKLGYTQTNVGEALAAVHGSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAE
ENSMUSP00000135113
Homeodomain
215
271
RKRRTTISVAAKDALERHFGEHSKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKR
ENSMUSP00000135574
POU
153
224
PEIRELEQFANEFKVRRIKLGYTQTNVGEALAAVHGSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAE
ENSMUSP00000135574
Homeodomain
241
297
RKRRTTISVAAKDALERHFGEHSKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKR
ENSMUSP00000139087
POU
125
196
PEIRELEQFANEFKVRRIKLGYTQTNVGEALAAVHGSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAE
ENSMUSP00000139087
Homeodomain
213
269
RKRRTTISVAAKDALERHFGEHSKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKR
Links
Other
Homeodomain,POU
family TFs
Other
Mus musculus
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action