CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GM26870
(
Drosophila sechellia
)
Homeodomain,POU
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
PF00157 (Pou)
IPR001356
IPR000327
FBgn0181720
T238747_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nub
M03906_2.00
Drosophila melanogaster
DTATGYWAATNN
NNATTWRCATAH
SELEX
Nitta et al.(2015)
nub_1
1.000
1.000
nub
M06556_2.00
Drosophila melanogaster
TATGYAAATNMD
HKNATTTRCATA
B1H
Mathelier et al.(2014)
MA0197.2
1.000
1.000
nub
M09685_2.00
Drosophila melanogaster
NDTATGYAARN
NYTTRCATAHN
Misc
Kulakovskiy et al.(2009)
nub
1.000
1.000
For this family, TFs with SR scores >
0.993
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0208347
POU
424
495
TDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLQKWLDDAD
FBpp0208347
Homeodomain
524
580
RKKRTSIETTIRGALEKAFLANQKPTSEEITQLADRLSMEKEVVRVWFCNRRQKEKR
Links
Other
Homeodomain,POU
family TFs
Other
Drosophila sechellia
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy