CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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unc-86
(
Caenorhabditis elegans
)
Homeodomain,POU
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
PF00157 (Pou)
IPR001356
IPR000327
WBGene00006818
T238867_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
unc-86
M02244_2.00
Caenorhabditis elegans
ATGCATAH
DTATGCAT
PBM
Weirauch et al.(2014)
pTH8341
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.993
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M02244_2.00
POU
54
128
TDPRQLETFAEHFKQRRIKLGVTQADVGKALAHLKMPGVGSLSQSTICRFESLTLSHNNMVALKPILHSWLEKAE
M02244_2.00
Homeodomain
150
206
KRKRTSIAAPEKRELEQFFKQQPRPSGERIASIADRLDLKKNVVRVWFCNQRQKQKR
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
C30A5.7a
POU
120
194
TDPRQLETFAEHFKQRRIKLGVTQADVGKALAHLKMPGVGSLSQSTICRFESLTLSHNNMVALKPILHSWLEKAE
C30A5.7a
Homeodomain
216
272
KRKRTSIAAPEKRELEQFFKQQPRPSGERIASIADRLDLKKNVVRVWFCNQRQKQKR
C30A5.7b
POU
158
232
TDPRQLETFAEHFKQRRIKLGVTQADVGKALAHLKMPGVGSLSQSTICRFESLTLSHNNMVALKPILHSWLEKAE
C30A5.7b
Homeodomain
254
310
KRKRTSIAAPEKRELEQFFKQQPRPSGERIASIADRLDLKKNVVRVWFCNQRQKQKR
Links
Other
Homeodomain,POU
family TFs
Other
Caenorhabditis elegans
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CRE25126
Caenorhabditis remanei
CRE25126
I
1.000
CBN19903
Caenorhabditis brenneri
CBN19903
I
1.000
CBG16662
Caenorhabditis briggsae
CBG16662
I
1.000