Alligator_sinensis_CCG019449.1 (Alligator sinensis)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00447 (HSF_DNA-bind) IPR000232 Alligator_sinensis_CCG019449.1 T242542_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HSF2
M03324_2.00 		Homo sapiens
GAANVTTCTAGAA
TTCTAGAABNTTC		 SELEX
Jolma et al.(2013)
HSF2_1 		0.323 0.689
HSF2
M02744_2.00 		Homo sapiens
GAABGTTCTRGA
TCYAGAACVTTC		 SELEX
Jolma et al.(2010)
HSF2_dimertrimer 		0.323 0.689
HSF2
M05505_2.00 		Homo sapiens
VGAABVTTCBVGAWN
NWTCBVGAABVTTCB		 SELEX
Yin et al.(2017)
HSF2_eDBD_HT-SELEX 		0.323 0.689
HSF2
M05507_2.00 		Homo sapiens
VGAANNTTCBVGAAN
NTTCBVGAANNTTCB		 SELEX
Yin et al.(2017)
HSF2_FL_HT-SELEX 		0.323 0.689
HSF2
M09229_2.00 		Homo sapiens
VGAABVTTCKVGAN
NTCBMGAABVTTCB		 Misc
Kulakovskiy et al.(2013)
HSF2_HUMAN.H11MO.0.A 		0.323 0.689
Hsf2
M09231_2.00 		Mus musculus
VGAABVTTCKVGAN
NTCBMGAABVTTCB		 Misc
Kulakovskiy et al.(2013)
HSF2_MOUSE.H11MO.0.A 		0.323 0.689
HSF2
M10859_2.00 		Homo sapiens
VGAANNWTCB
VGAWNNTTCB		 Transfac
Matys et al.(2006)
V$HSF2_01 		0.323 0.689
HSF2
M10860_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF2_02 		0.323 0.689
HSF2
M10861_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF2_Q6 		0.323 0.689
HSF2
M05506_2.00 		Homo sapiens
RGAABVTTCYRGAWN
NWTCYRGAABVTTCY		 SELEX
Yin et al.(2017)
HSF2_eDBD_Methyl-HT-SELEX 		0.323 0.689
HSF2
M05508_2.00 		Homo sapiens
RGAABVTTCYRGAWN
NWTCYRGAABVTTCY		 SELEX
Yin et al.(2017)
HSF2_FL_Methyl-HT-SELEX 		0.323 0.689
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG019449.1 HSF 16 84

Links

Other HSF family TFs
Other Alligator sinensis TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG019449.2 Alligator sinensis Alligator_sinensis_CCG019449.2 I 0.452
hsf2.2 Xenopus tropicalis XB-GENE-5919609 I 0.356
ENSDNOG00000048985 Dasypus novemcinctus ENSDNOG00000048985 I 0.352
ENSMODG00000027338 Monodelphis domestica ENSMODG00000027338 I 0.349
Ogr00694 Ophisaurus gracilis Ogr00694 I 0.333
ENSGALG00000014870 Gallus gallus ENSGALG00000014870 I 0.333
ENSGMOG00000014148 Gadus morhua ENSGMOG00000014148 I 0.333
Alligator_sinensis_CCG019450.1 Alligator sinensis Alligator_sinensis_CCG019450.1 I 0.333
ENSGALG00000004644 Gallus gallus ENSGALG00000004644 I 0.330
ENSACAG00000003529 Anolis carolinensis ENSACAG00000003529 I 0.330
HSF2 Anolis carolinensis ENSACAG00000001260 I 0.328
ENSFALG00000011294 Ficedula albicollis ENSFALG00000011294 I 0.327
HSF2 Taeniopygia guttata ENSTGUG00000011838 I 0.327
HSF2 Procavia capensis ENSPCAG00000016109 I 0.323
ENSPANG00000022516 Papio anubis ENSPANG00000022516 I 0.323
HSF2 Oryctolagus cuniculus ENSOCUG00000025991 I 0.323
ENSOARG00000008274 Ovis aries ENSOARG00000008274 I 0.323
ENSPPYG00000016976 Pongo abelii ENSPPYG00000016976 I 0.323
HSF2 Otolemur garnettii ENSOGAG00000015721 I 0.323
Hsf2 Rattus norvegicus ENSRNOG00000000808 I 0.323
ENSTBEG00000013569 Tupaia belangeri ENSTBEG00000013569 I 0.323
ENSAMEG00000007373 Ailuropoda melanoleuca ENSAMEG00000007373 I 0.323
ENSSHAG00000013467 Sarcophilus harrisii ENSSHAG00000013467 I 0.323
ENSNLEG00000013721 Nomascus leucogenys ENSNLEG00000013721 I 0.323
hsf2.L Xenopus laevis XB-GENE-954983 I 0.323
ENSP00000357440-D1 Bos grunniens ENSP00000357440-D1 I 0.323
HSF2 Pan troglodytes ENSPTRG00000018561 I 0.323
Hsf2 Mus musculus ENSMUSG00000019878 D 0.323
HSF2 Erinaceus europaeus ENSEEUG00000000435 I 0.323
HSF2 Echinops telfairi ENSETEG00000006154 I 0.323
ENSCHOG00000010951 Choloepus hoffmanni ENSCHOG00000010951 I 0.323
HSF2 Bos taurus ENSBTAG00000012946 I 0.323
HSF2 Dasypus novemcinctus ENSDNOG00000031260 I 0.323
HSF2 Callithrix jacchus ENSCJAG00000003956 I 0.323
ENSCSAG00000016240 Chlorocebus sabaeus ENSCSAG00000016240 I 0.323
HSF2 Cavia porcellus ENSCPOG00000007509 I 0.323
HSF2 Homo sapiens ENSG00000025156 D 0.323
ENSMICG00000006415 Microcebus murinus ENSMICG00000006415 I 0.323
HSF2 Myotis lucifugus ENSMLUG00000002355 I 0.323
HSF2 Macaca mulatta ENSMMUG00000007910 I 0.323
HSF2 Gorilla gorilla ENSGGOG00000023192 I 0.323
ENSMPUG00000014453 Mustela putorius furo ENSMPUG00000014453 I 0.323
HSF2 Monodelphis domestica ENSMODG00000017753 I 0.323
HSF2 Loxodonta africana ENSLAFG00000006440 I 0.323
HSF2 Pteropus vampyrus ENSPVAG00000010870 I 0.322
V499_02686 Pseudogymnoascus pannorum V499_02686 I 0.320
GMDG_04555 Pseudogymnoascus destructans GMDG_04555 I 0.320
HSF4 Felis catus ENSFCAG00000014099 I 0.318
Pvit_13286 Pogona vitticeps Pvit_13286 I 0.318