Alligator_sinensis_CCG021936.1 (Alligator sinensis)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00447 (HSF_DNA-bind) IPR000232 Alligator_sinensis_CCG021936.1 T242547_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HSF1
M03329_2.00 		Homo sapiens
GAANVTTCBVGAA
TTCBVGAABNTTC		 SELEX
Jolma et al.(2013)
HSF1_1 		0.501 0.806
HSF1
M03330_2.00 		Homo sapiens
GAANRTTCBAGAA
TTCTVGAAYNTTC		 SELEX
Jolma et al.(2013)
HSF1_2 		0.501 0.806
HSF1
M05523_2.00 		Homo sapiens
VGAABVTTCBVGAWN
NWTCBVGAABVTTCB		 SELEX
Yin et al.(2017)
HSF1_eDBD_HT-SELEX 		0.501 0.806
HSF1
M05525_2.00 		Homo sapiens
VGAANRTTCKVGAAN
NTTCBMGAAYNTTCB		 SELEX
Yin et al.(2017)
HSF1_FL_HT-SELEX 		0.501 0.806
HSF1
M07977_2.00 		Homo sapiens
GDCSYGGGTTCRADYCCC
GGGRHTYGAACCCRSGHC		 ChIP-seq
Gerstein et al.(2012)
HepG2_HSF1_Stanford 		0.501 0.806
HSF1
M09230_2.00 		Homo sapiens
NRGAANNTTCYRGAA
TTCYRGAANNTTCYN		 Misc
Kulakovskiy et al.(2013)
HSF1_HUMAN.H11MO.0.A 		0.501 0.806
Hsf1
M09232_2.00 		Mus musculus
NRGAANNTTCYRGAA
TTCYRGAANNTTCYN		 Misc
Kulakovskiy et al.(2013)
HSF1_MOUSE.H11MO.0.A 		0.501 0.806
HSF1
M09592_2.00 		Homo sapiens
NNBBCYRGAANNTTCYRGVV
BBCYRGAANNTTCYRGVVNN		 Misc
Heinz et al.(2010)
HepG2-HSF1_GSE31477 		0.501 0.806
Hsf1
M09593_2.00 		Mus musculus
NRGAANNTTCYRGAA
TTCYRGAANNTTCYN		 Misc
Heinz et al.(2010)
Striatum-HSF1_GSE38000 		0.501 0.806
HSF1
M10863_2.00 		Homo sapiens
NGAAHNTTCY
RGAANDTTCN		 Transfac
Matys et al.(2006)
V$HSF1_01 		0.501 0.806
HSF1
M10864_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF1_Q5_01 		0.501 0.806
HSF1
M10865_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF1_Q5 		0.501 0.806
HSF1
M10866_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF1_Q6_01 		0.501 0.806
HSF1
M10867_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF1_Q6 		0.501 0.806
HSF1
M10868_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF_Q6 		0.501 0.806
HSF1
M05524_2.00 		Homo sapiens
RGAANRTTCYRGAWN
NWTCYRGAAYNTTCY		 SELEX
Yin et al.(2017)
HSF1_eDBD_Methyl-HT-SELEX 		0.501 0.806
HSF1
M05526_2.00 		Homo sapiens
RGAANVTTCYRGAWN
NWTCYRGAABNTTCY		 SELEX
Yin et al.(2017)
HSF1_FL_Methyl-HT-SELEX 		0.501 0.806
HSF4
M03325_2.00 		Homo sapiens
GAANNTTCBVGAA
TTCBVGAANNTTC		 SELEX
Jolma et al.(2013)
HSF4_1 		0.365 0.624
HSF4
M05509_2.00 		Homo sapiens
VGAABVTTCKVGAAN
NTTCBMGAABVTTCB		 SELEX
Yin et al.(2017)
HSF4_eDBD_HT-SELEX 		0.365 0.624
HSF4
M10862_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF4_Q3 		0.365 0.624
HSF4
M05510_2.00 		Homo sapiens
RGAABVWDCYRGAWN
NWTCYRGHWBVTTCY		 SELEX
Yin et al.(2017)
HSF4_eDBD_Methyl-HT-SELEX 		0.365 0.624
Hsf2
M09231_2.00 		Mus musculus
VGAABVTTCKVGAN
NTCBMGAABVTTCB		 Misc
Kulakovskiy et al.(2013)
HSF2_MOUSE.H11MO.0.A 		0.355 0.634
HSF2
M03324_2.00 		Homo sapiens
GAANVTTCTAGAA
TTCTAGAABNTTC		 SELEX
Jolma et al.(2013)
HSF2_1 		0.348 0.624
HSF2
M02744_2.00 		Homo sapiens
GAABGTTCTRGA
TCYAGAACVTTC		 SELEX
Jolma et al.(2010)
HSF2_dimertrimer 		0.348 0.624
HSF2
M05505_2.00 		Homo sapiens
VGAABVTTCBVGAWN
NWTCBVGAABVTTCB		 SELEX
Yin et al.(2017)
HSF2_eDBD_HT-SELEX 		0.348 0.624
HSF2
M05507_2.00 		Homo sapiens
VGAANNTTCBVGAAN
NTTCBVGAANNTTCB		 SELEX
Yin et al.(2017)
HSF2_FL_HT-SELEX 		0.348 0.624
HSF2
M09229_2.00 		Homo sapiens
VGAABVTTCKVGAN
NTCBMGAABVTTCB		 Misc
Kulakovskiy et al.(2013)
HSF2_HUMAN.H11MO.0.A 		0.348 0.624
HSF2
M10859_2.00 		Homo sapiens
VGAANNWTCB
VGAWNNTTCB		 Transfac
Matys et al.(2006)
V$HSF2_01 		0.348 0.624
HSF2
M10860_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF2_02 		0.348 0.624
HSF2
M10861_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF2_Q6 		0.348 0.624
HSF2
M05506_2.00 		Homo sapiens
RGAABVTTCYRGAWN
NWTCYRGAABVTTCY		 SELEX
Yin et al.(2017)
HSF2_eDBD_Methyl-HT-SELEX 		0.348 0.624
HSF2
M05508_2.00 		Homo sapiens
RGAABVTTCYRGAWN
NWTCYRGAABVTTCY		 SELEX
Yin et al.(2017)
HSF2_FL_Methyl-HT-SELEX 		0.348 0.624
hsf2
M02248_2.00 		Danio rerio
NNNWGTTCTATNN
NNATAGAACWNNN		 PBM
Weirauch et al.(2014)
pTH9010 		0.342 0.613
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG021936.1 HSF 15 114

Links

Other HSF family TFs
Other Alligator sinensis TFs

193 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSLACG00000013265 Latimeria chalumnae ENSLACG00000013265 I 0.542
Ogr05725 Ophisaurus gracilis Ogr05725 I 0.523
ENSLOCG00000007411 Lepisosteus oculatus ENSLOCG00000007411 I 0.523
Afo_R013442 Aptenodytes forsteri Afo_R013442 I 0.522
XP_002942927 Xenopus tropicalis XP_002942927 I 0.520
hsf1.S Xenopus laevis XB-GENE-997146 I 0.520
hsf1 Xenopus laevis XB-GENE-997145 I 0.520
Tal_R010556 Tyto alba Tal_R010556 I 0.520
Aan_R008377 Calypte anna Aan_R008377 I 0.520
Pvit_18730 Pogona vitticeps Pvit_18730 I 0.519
hsf1 Tetraodon nigroviridis ENSTNIG00000018157 I 0.519
HSF1 Anolis carolinensis ENSACAG00000012604 I 0.519
ENSONIG00000015330 Oreochromis niloticus ENSONIG00000015330 I 0.514
Brh_R008981 Buceros rhinoceros Brh_R008981 I 0.513
HSF1 Monodelphis domestica ENSMODG00000010663 I 0.511
hsf1 Gasterosteus aculeatus ENSGACG00000010434 I 0.509
ENSGALG00000016429 Gallus gallus ENSGALG00000016429 I 0.503
hsf1 Danio rerio ENSDARG00000008818 I 0.502
hsf4 Danio rerio ENSDARG00000013251 I 0.502
HSF1 Loxodonta africana ENSLAFG00000021374 I 0.502
ENSGMOG00000019339 Gadus morhua ENSGMOG00000019339 I 0.502
ENSLOCG00000007976 Lepisosteus oculatus ENSLOCG00000007976 I 0.502
ENSAMXG00000020456 Astyanax mexicanus ENSAMXG00000020456 I 0.502
XP_002937220 Xenopus tropicalis XP_002937220 I 0.502
HSF1 Homo sapiens ENSG00000185122 D 0.501
ENSTSYG00000006467 Tarsius syrichta ENSTSYG00000006467 I 0.501
HSF1 Felis catus ENSFCAG00000007722 I 0.501
ENSPANG00000005938 Papio anubis ENSPANG00000005938 I 0.501
HSF1 Gorilla gorilla ENSGGOG00000013602 I 0.501
Hsf1 Mus musculus ENSMUSG00000022556 D 0.501
ENSAMEG00000005847 Ailuropoda melanoleuca ENSAMEG00000005847 I 0.501
HSF1 Macaca mulatta ENSMMUG00000014728 I 0.501
ENSMPUG00000006704 Mustela putorius furo ENSMPUG00000006704 I 0.501
ENSAPLG00000007598 Anas platyrhynchos ENSAPLG00000007598 I 0.501
HSF1 Canis familiaris ENSCAFG00000001563 I 0.501
Cmyd_10013638 Chelonia mydas Cmyd_10013638 I 0.501
ENSACAG00000013094 Anolis carolinensis ENSACAG00000013094 I 0.501
ENSCSAG00000008638 Chlorocebus sabaeus ENSCSAG00000008638 I 0.501
HSF1 Pteropus vampyrus ENSPVAG00000009267 I 0.501
ENSPPYG00000018969 Pongo abelii ENSPPYG00000018969 I 0.501
Pvit_07213 Pogona vitticeps Pvit_07213 I 0.501
Ogr12192 Ophisaurus gracilis Ogr12192 I 0.501
Hsf1 Rattus norvegicus ENSRNOG00000021732 I 0.501
HSF1 Cavia porcellus ENSCPOG00000019305 I 0.501
ENSSTOG00000007173 Ictidomys tridecemlineatus ENSSTOG00000007173 I 0.501
Hsf1 Dipodomys ordii ENSDORG00000002333 I 0.501
ENSPFOG00000004675 Poecilia formosa ENSPFOG00000004675 I 0.500
ENSXMAG00000005948 Xiphophorus maculatus ENSXMAG00000005948 I 0.500
ENSAMXG00000012942 Astyanax mexicanus ENSAMXG00000012942 I 0.500
hsf4 Gasterosteus aculeatus ENSGACG00000013994 I 0.500
hsf4 Oryzias latipes ENSORLG00000013768 I 0.500
hsf1 Takifugu rubripes ENSTRUG00000000233 I 0.500
ENSONIG00000010204 Oreochromis niloticus ENSONIG00000010204 I 0.500
ENSMLUG00000002310 Myotis lucifugus ENSMLUG00000002310 I 0.498
HSF1 Dasypus novemcinctus ENSDNOG00000047071 I 0.498
ENSMLUG00000029200 Myotis lucifugus ENSMLUG00000029200 I 0.497
HSF1 Equus caballus ENSECAG00000000621 I 0.495
ENSPSIG00000012111 Pelodiscus sinensis ENSPSIG00000012111 I 0.495
ENSXMAG00000001905 Xiphophorus maculatus ENSXMAG00000001905 I 0.493
hsf1 Oryzias latipes ENSORLG00000001699 I 0.492
HSF1 Ornithorhynchus anatinus ENSOANG00000001941 I 0.492
HSF1 Ochotona princeps ENSOPRG00000004863 I 0.491
ENSOARG00000014186 Ovis aries ENSOARG00000014186 I 0.487
ENSP00000332698-D1 Bos grunniens ENSP00000332698-D1 I 0.487
HSF1 Echinops telfairi ENSETEG00000002048 I 0.487
HSF1 Otolemur garnettii ENSOGAG00000028708 I 0.487
HSF1 Bos taurus ENSBTAG00000020751 I 0.487
ENSPFOG00000003038 Poecilia formosa ENSPFOG00000003038 I 0.485
HSF1 Sus scrofa ENSSSCG00000005917 I 0.485
Afo_R009212 Aptenodytes forsteri Afo_R009212 I 0.484
HSF4 Taeniopygia guttata ENSTGUG00000006716 I 0.484
Aan_R011648 Calypte anna Aan_R011648 I 0.484
Gfo_R015956 Geospiza fortis Gfo_R015956 I 0.484
ENSFALG00000007632 Ficedula albicollis ENSFALG00000007632 I 0.484
HSF4 Gallus gallus ENSGALG00000003224 I 0.483
HSF4 Meleagris gallopavo ENSMGAG00000000886 I 0.483
Brh_R001747 Buceros rhinoceros Brh_R001747 I 0.483
ENSAPLG00000005338 Anas platyrhynchos ENSAPLG00000005338 I 0.483
ENSP00000332698 Macaca fascicularis ENSP00000332698 I 0.481
ENSNLEG00000010525 Nomascus leucogenys ENSNLEG00000010525 I 0.481
HSF1 Callithrix jacchus ENSCJAG00000021431 I 0.478
HSF1 Procavia capensis ENSPCAG00000006962 I 0.474
HSF1 Oryctolagus cuniculus ENSOCUG00000012921 I 0.471
ENSMLUG00000015849 Myotis lucifugus ENSMLUG00000015849 I 0.470
ENSSHAG00000010769 Sarcophilus harrisii ENSSHAG00000010769 I 0.468
HSF1 Tursiops truncatus ENSTTRG00000006426 I 0.467
Alligator_sinensis_CCG021829.1 Alligator sinensis Alligator_sinensis_CCG021829.1 I 0.466
Tal_R012818 Tyto alba Tal_R012818 I 0.464
ENSPMAG00000004630 Petromyzon marinus ENSPMAG00000004630 I 0.461
ENSTNIG00000002981 Tetraodon nigroviridis ENSTNIG00000002981 I 0.458
ENSMEUG00000001857 Macropus eugenii ENSMEUG00000001857 I 0.448
ENSTRUG00000000721 Takifugu rubripes ENSTRUG00000000721 I 0.443
CapteG130381 Capitella teleta CapteG130381 I 0.424
CGI_10007406 Crassostrea gigas CGI_10007406 I 0.422
e_gw.6.354.1 Branchiostoma floridae e_gw.6.354.1 I 0.401
LotgiG214431 Lottia gigantea LotgiG214431 I 0.398
HSF4 Monodelphis domestica ENSMODG00000006228 I 0.395
AMAM013792 Anopheles maculatus AMAM013792 I 0.393
ENSGMOG00000000596 Gadus morhua ENSGMOG00000000596 I 0.391
Cmyd_10002799 Chelonia mydas Cmyd_10002799 I 0.379
ENSPSIG00000013559 Pelodiscus sinensis ENSPSIG00000013559 I 0.374
HSF4 Cavia porcellus ENSCPOG00000010834 I 0.371
ENSCSAG00000003768 Chlorocebus sabaeus ENSCSAG00000003768 I 0.365
HSF4 Equus caballus ENSECAG00000016708 I 0.365
ENSSTOG00000027009 Ictidomys tridecemlineatus ENSSTOG00000027009 I 0.365
HSF4 Sus scrofa ENSSSCG00000002792 I 0.365
HSF4 Pteropus vampyrus ENSPVAG00000000402 I 0.365
HSF4 Canis familiaris ENSCAFG00000020379 I 0.365
ENSPANG00000005017 Papio anubis ENSPANG00000005017 I 0.365
Hsf4 Dipodomys ordii ENSDORG00000015128 I 0.365
HSF4 Pan troglodytes ENSPTRG00000034007 I 0.365
ENSPPYG00000007441 Pongo abelii ENSPPYG00000007441 I 0.365
HSF4 Homo sapiens ENSG00000102878 D 0.365
HSF4 Otolemur garnettii ENSOGAG00000001391 I 0.365
ENSBTAP00000004568-D1 Bos grunniens ENSBTAP00000004568-D1 I 0.365
HSF4 Tursiops truncatus ENSTTRG00000010241 I 0.365
HSF4 Oryctolagus cuniculus ENSOCUG00000010001 I 0.365
HSF4 Gorilla gorilla ENSGGOG00000011899 I 0.365
ENSNLEG00000004338 Nomascus leucogenys ENSNLEG00000004338 I 0.365
ENSAMEG00000017238 Ailuropoda melanoleuca ENSAMEG00000017238 I 0.365
HSF4 Macaca mulatta ENSMMUG00000005906 I 0.365
ENSMPUG00000005418 Mustela putorius furo ENSMPUG00000005418 I 0.365
HSF4 Bos taurus ENSBTAG00000003514 I 0.365
Hsf4 Mus musculus ENSMUSG00000033249 I 0.365
ENSOARG00000002740 Ovis aries ENSOARG00000002740 I 0.365
HSF4 Callithrix jacchus ENSCJAG00000016481 I 0.364
HSF4 Loxodonta africana ENSLAFG00000021984 I 0.363
HSF4 Ochotona princeps ENSOPRG00000015074 I 0.363
HSF4 Felis catus ENSFCAG00000014099 I 0.363
HSF4 Myotis lucifugus ENSMLUG00000011083 I 0.362
Myotis_brandtii_HSF1_10006459 Myotis brandtii Myotis_brandtii_HSF1_10006459 I 0.360
HSF4 Dasypus novemcinctus ENSDNOG00000032363 I 0.359
Hsf4 Rattus norvegicus ENSRNOG00000015253 I 0.358
Hsf2 Mus musculus ENSMUSG00000019878 D 0.355
HSF4 Procavia capensis ENSPCAG00000013012 I 0.355
ENSTBEG00000013569 Tupaia belangeri ENSTBEG00000013569 I 0.348
ENSP00000357440-D1 Bos grunniens ENSP00000357440-D1 I 0.348
ENSOARG00000008274 Ovis aries ENSOARG00000008274 I 0.348
HSF2 Gorilla gorilla ENSGGOG00000023192 I 0.348
HSF2 Bos taurus ENSBTAG00000012946 I 0.348
ENSMPUG00000014453 Mustela putorius furo ENSMPUG00000014453 I 0.348
ENSNLEG00000013721 Nomascus leucogenys ENSNLEG00000013721 I 0.348
HSF2 Homo sapiens ENSG00000025156 D 0.348
HSF2 Cavia porcellus ENSCPOG00000007509 I 0.348
HSF2 Macaca mulatta ENSMMUG00000007910 I 0.348
HSF2 Loxodonta africana ENSLAFG00000006440 I 0.348
ENSCHOG00000010951 Choloepus hoffmanni ENSCHOG00000010951 I 0.348
ENSMICG00000006415 Microcebus murinus ENSMICG00000006415 I 0.348
HSF2 Myotis lucifugus ENSMLUG00000002355 I 0.348
HSF2 Oryctolagus cuniculus ENSOCUG00000025991 I 0.348
HSF2 Otolemur garnettii ENSOGAG00000015721 I 0.348
HSF2 Erinaceus europaeus ENSEEUG00000000435 I 0.348
ENSPPYG00000016976 Pongo abelii ENSPPYG00000016976 I 0.348
HSF2 Pan troglodytes ENSPTRG00000018561 I 0.348
HSF2 Dasypus novemcinctus ENSDNOG00000031260 I 0.348
ENSCSAG00000016240 Chlorocebus sabaeus ENSCSAG00000016240 I 0.348
HSF2 Procavia capensis ENSPCAG00000016109 I 0.348
ENSPANG00000022516 Papio anubis ENSPANG00000022516 I 0.348
HSF2 Callithrix jacchus ENSCJAG00000003956 I 0.348
ENSAMEG00000007373 Ailuropoda melanoleuca ENSAMEG00000007373 I 0.348
hsf2 Gasterosteus aculeatus ENSGACG00000004065 I 0.346
D915_14985 Fasciola hepatica D915_14985 I 0.345
HSF2 Echinops telfairi ENSETEG00000006154 I 0.345
ENSSHAG00000013467 Sarcophilus harrisii ENSSHAG00000013467 I 0.344
HSF2 Monodelphis domestica ENSMODG00000017753 I 0.344
Hsf2 Rattus norvegicus ENSRNOG00000000808 I 0.344
ENSLACG00000002436 Latimeria chalumnae ENSLACG00000002436 I 0.344
ENSSHAG00000000079 Sarcophilus harrisii ENSSHAG00000000079 I 0.343
Hsf2 Dipodomys ordii ENSDORG00000012571 I 0.343
hsf2 Danio rerio ENSDARG00000053097 D 0.342
ENSONIG00000001677 Oreochromis niloticus ENSONIG00000001677 I 0.342
hsf2.L Xenopus laevis XB-GENE-954983 I 0.342
SMAR008659 Strigamia maritima SMAR008659 I 0.342
ENSAMXG00000017965 Astyanax mexicanus ENSAMXG00000017965 I 0.339
Sakowv30012471m.g Saccoglossus kowalevskii Sakowv30012471m.g I 0.338
XP_002937262 Xenopus tropicalis XP_002937262 I 0.337
XP_002937261 Xenopus tropicalis XP_002937261 I 0.337
ENSFALG00000000369 Ficedula albicollis ENSFALG00000000369 I 0.335
T265_09239 Opisthorchis viverrini T265_09239 I 0.335
ENSCSAG00000005351 Chlorocebus sabaeus ENSCSAG00000005351 I 0.333
ENSGMOG00000014148 Gadus morhua ENSGMOG00000014148 I 0.331
tetur02g00310 Tetranychus urticae tetur02g00310 I 0.330
ENSDNOG00000039613 Dasypus novemcinctus ENSDNOG00000039613 I 0.328
hsf2 Oryzias latipes ENSORLG00000015498 I 0.328
ENSTGUG00000014996 Taeniopygia guttata ENSTGUG00000014996 I 0.327
ENSFCAG00000025714 Felis catus ENSFCAG00000025714 I 0.321
ENSTSYG00000005378 Tarsius syrichta ENSTSYG00000005378 I 0.320
HSF2 Tursiops truncatus ENSTTRG00000000247 I 0.320
ENSOANG00000002419 Ornithorhynchus anatinus ENSOANG00000002419 N 0.320
Myotis_brandtii_FBXL8_10015042 Myotis brandtii Myotis_brandtii_FBXL8_10015042 I 0.320
ENSLOCG00000017255 Lepisosteus oculatus ENSLOCG00000017255 I 0.320
HSF2 Vicugna pacos ENSVPAG00000009387 I 0.320
XP_002937263 Xenopus tropicalis XP_002937263 I 0.319