CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Pvit_11979
(
Pogona vitticeps
)
HSF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00447 (HSF_DNA-bind)
IPR000232
Pvit_11979
T242658_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HSF5
M05519_2.00
Homo sapiens
NRCRTTCTAGAACGYN
NRCGTTCTAGAAYGYN
SELEX
Yin et al.(2017)
HSF5_eDBD_HT-SELEX_1
0.329
0.714
HSF5
M05520_2.00
Homo sapiens
YVGAAYRYNNNNNNNNNBHACRTTCBR
YVGAAYGTDVNNNNNNNNNRYRTTCBR
SELEX
Yin et al.(2017)
HSF5_eDBD_HT-SELEX_2
0.329
0.714
HSF5
M05521_2.00
Homo sapiens
AACRTTCTAGAAYGTT
AACRTTCTAGAAYGTT
SELEX
Yin et al.(2017)
HSF5_eDBD_Methyl-HT-SELEX_1
0.329
0.714
HSF5
M05522_2.00
Homo sapiens
YRGAAYDYNVNNNNNNNBAACRTTCYR
YRGAAYGTTVNNNNNNNBNRHRTTCYR
SELEX
Yin et al.(2017)
HSF5_eDBD_Methyl-HT-SELEX_2
0.329
0.714
For this family, TFs with SR scores >
0.318
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pvit_11979
HSF
49
142
TPGASAAAAASPELFKTTNFTSFIRQLNLYGFRKVVLGPPAGGGGGGGGGGAASSSSSGSSGGVGAGGGPVHHFHSPHFRRDRPELLVHLKRLT
Links
Other
HSF
family TFs
Other
Pogona vitticeps
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HSF5
Gallus gallus
ENSGALG00000001031
I
0.357
Afo_R005296
Aptenodytes forsteri
Afo_R005296
N
0.336
HSF5
Pan troglodytes
ENSPTRG00000009453
I
0.329
HSF5
Homo sapiens
ENSG00000176160
D
0.329
ENSSTOG00000020272
Ictidomys tridecemlineatus
ENSSTOG00000020272
I
0.325
HSF5
Sus scrofa
ENSSSCG00000017641
I
0.325
ENSPPYG00000008231
Pongo abelii
ENSPPYG00000008231
I
0.325
Hsf5
Mus musculus
ENSMUSG00000070345
I
0.325
HSF5
Canis familiaris
ENSCAFG00000017528
I
0.325
HSF5
Dasypus novemcinctus
ENSDNOG00000014871
I
0.325
ENSMEUG00000007286
Macropus eugenii
ENSMEUG00000007286
I
0.325
HSF5
Bos taurus
ENSBTAG00000001166
I
0.325
HSF5
Procavia capensis
ENSPCAG00000011323
I
0.325