CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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e_gw1.4.824.1
(
Fragilariopsis cylindrus
)
HSF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00447 (HSF_DNA-bind)
IPR000232
e_gw1.4.824.1
T242788_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw1.4.824.1
HSF
1
94
MLRISKSEGNDSIVSWLPAPYPHTSSNRFKVHNVSEFVSNILPLFFSNQTKFKSFQRQLNLWGFLRIQNGPEKGAYYHKYFLQDSPDLCRLLTR
Links
Other
HSF
family TFs
Other
Fragilariopsis cylindrus
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgenesh2_kg.C_80112
Fragilariopsis cylindrus
estExt_fgenesh2_kg.C_80112
N
0.436
e_gw1.27.180.1
Fragilariopsis cylindrus
e_gw1.27.180.1
N
0.369
gw1.27.181.1
Fragilariopsis cylindrus
gw1.27.181.1
N
0.367
e_gw1.94.63.1
Fragilariopsis cylindrus
e_gw1.94.63.1
N
0.353
Cagra.0096s0075
Capsella grandiflora
Cagra.0096s0075
I
0.352
gw1.1.2017.1
Fragilariopsis cylindrus
gw1.1.2017.1
N
0.352
Carubv10021131m.g
Capsella rubella
Carubv10021131m.g
I
0.352
gw1.35.99.1
Fragilariopsis cylindrus
gw1.35.99.1
N
0.340
Thaps263978
Thalassiosira pseudonana
Thaps263978
N
0.339
estExt_Genewise1.C_11901
Fragilariopsis cylindrus
estExt_Genewise1.C_11901
N
0.336
Phatr3_J44684
Phaeodactylum tricornutum
Phatr3_J44684
N
0.329
Bostr.20129s0193
Boechera stricta
Bostr.20129s0193
I
0.326
Phatr3_J48667
Phaeodactylum tricornutum
Phatr3_J48667
N
0.326
Phatr3_EG02471
Phaeodactylum tricornutum
Phatr3_EG02471
N
0.326
Phatr3_EG00322
Phaeodactylum tricornutum
Phatr3_EG00322
N
0.326
Thaps6958
Thalassiosira pseudonana
Thaps6958
N
0.322
Thhalv10027510m.g
Eutrema salsugineum
Thhalv10027510m.g
I
0.322
Phatr3_J44917
Phaeodactylum tricornutum
Phatr3_J44917
N
0.322
estExt_Genewise1Plus.C_130130
Fragilariopsis cylindrus
estExt_Genewise1Plus.C_130130
N
0.319
Phatr3_J43363
Phaeodactylum tricornutum
Phatr3_J43363
N
0.318