estExt_fgenesh2_pg.C_2160042 (Branchiostoma floridae)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00447 (HSF_DNA-bind) IPR000232 estExt_fgenesh2_pg.C_2160042 T242824_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HSF5
M05519_2.00 		Homo sapiens
NRCRTTCTAGAACGYN
NRCGTTCTAGAAYGYN		 SELEX
Yin et al.(2017)
HSF5_eDBD_HT-SELEX_1 		0.324 0.452
HSF5
M05520_2.00 		Homo sapiens
YVGAAYRYNNNNNNNNNBHACRTTCBR
YVGAAYGTDVNNNNNNNNNRYRTTCBR		 SELEX
Yin et al.(2017)
HSF5_eDBD_HT-SELEX_2 		0.324 0.452
HSF5
M05521_2.00 		Homo sapiens
AACRTTCTAGAAYGTT
AACRTTCTAGAAYGTT		 SELEX
Yin et al.(2017)
HSF5_eDBD_Methyl-HT-SELEX_1 		0.324 0.452
HSF5
M05522_2.00 		Homo sapiens
YRGAAYDYNVNNNNNNNBAACRTTCYR
YRGAAYGTTVNNNNNNNBNRHRTTCYR		 SELEX
Yin et al.(2017)
HSF5_eDBD_Methyl-HT-SELEX_2 		0.324 0.452
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh2_pg.C_2160042 HSF 53 153

Links

Other HSF family TFs
Other Branchiostoma floridae TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
estExt_fgenesh2_pg.C_2160046 Branchiostoma floridae estExt_fgenesh2_pg.C_2160046 I 0.655
HSF5 Pteropus vampyrus ENSPVAG00000002322 I 0.334
HSF5 Gorilla gorilla ENSGGOG00000013788 I 0.331
HSF5 Pan troglodytes ENSPTRG00000009453 I 0.324
HSF5 Homo sapiens ENSG00000176160 D 0.324