CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pg.C_90116
(
Fragilariopsis cylindrus
)
HSF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00447 (HSF_DNA-bind)
IPR000232
estExt_fgenesh2_pg.C_90116
T242832_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_90116
HSF
196
287
FLYQLTKMLTDNNRDIIEWSNSKIEVHSPHKLETLVLNRYFRHSKFASFQRQLNYFGFRKLAGKGKMAPCSYVNDATTDELGSLLLIKRKQG
Links
Other
HSF
family TFs
Other
Fragilariopsis cylindrus
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Phatr3_J35419
Phaeodactylum tricornutum
Phatr3_J35419
N
0.540
Thaps9086
Thalassiosira pseudonana
Thaps9086
N
0.511
Phatr3_J45666
Phaeodactylum tricornutum
Phatr3_J45666
N
0.488
Thapsdraft1071
Thalassiosira pseudonana
Thapsdraft1071
N
0.487
Thaps1785
Thalassiosira pseudonana
Thaps1785
N
0.425
Thaps269238
Thalassiosira pseudonana
Thaps269238
N
0.375
Thaps6935
Thalassiosira pseudonana
Thaps6935
I
0.356
Thaps6765
Thalassiosira pseudonana
Thaps6765
N
0.348