IRF6 (Erinaceus europaeus)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSEEUG00000003813 T244049_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irf6
M00176_2.00 		Mus musculus
NNNHGADASN
NSTHTCDNNN		 PBM
Badis et al.(2009)
Irf6_3803 		1.000 1.000
IRF6
M05527_2.00 		Homo sapiens
RGTWTCGNNNNNNYGAWACY
RGTWTCRNNNNNNCGAWACY		 SELEX
Yin et al.(2017)
IRF6_eDBD_HT-SELEX 		1.000 1.000
IRF6
M05529_2.00 		Homo sapiens
ACCGAAACT
AGTTTCGGT		 SELEX
Yin et al.(2017)
IRF6_FL_HT-SELEX 		1.000 1.000
IRF6
M05528_2.00 		Homo sapiens
RGTWTCGNHNNDNYGAWACY
RGTWTCRNHNNDNCGAWACY		 SELEX
Yin et al.(2017)
IRF6_eDBD_Methyl-HT-SELEX 		1.000 1.000
IRF6
M05530_2.00 		Homo sapiens
ACCGAWACY
RGTWTCGGT		 SELEX
Yin et al.(2017)
IRF6_FL_Methyl-HT-SELEX 		1.000 1.000
IRF6
M02253_2.00 		Gallus gallus
NNMCNAAWNN
NNWTTNGKNN		 PBM
Weirauch et al.(2014)
pTH9178 		0.918 0.918
IRF6
M02254_2.00 		Meleagris gallopavo
NRNCGAWACY
RGTWTCGNYN		 PBM
Weirauch et al.(2014)
pTH9210 		0.918 0.918
irf6.2
M02259_2.00 		Xenopus tropicalis
NVNHGAWACH
DGTWTCDNBN		 PBM
Weirauch et al.(2014)
pTH9302 		0.918 0.918
irf5.L
M02260_2.00 		Xenopus laevis
VNCGADACHN
NDGTHTCGNB		 PBM
Weirauch et al.(2014)
pTH9367 		0.735 0.735
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSEEUP00000003473 IRF 9 74

Links

Other IRF family TFs
Other Erinaceus europaeus TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
IRF6 Tupaia belangeri ENSTBEG00000017451 I 1.000
IRF6 Ornithorhynchus anatinus ENSOANG00000013718 I 0.959
ENSMEUG00000014941 Macropus eugenii ENSMEUG00000014941 I 0.939
IRF6 Monodelphis domestica ENSMODG00000002539 I 0.939
irf6.2 Xenopus tropicalis XB-GENE-5910331 D 0.918
IRF6 Anolis carolinensis ENSACAG00000005931 I 0.918
irf6.2.L Xenopus laevis XB-GENE-5910427 I 0.898
Pvit_15428 Pogona vitticeps Pvit_15428 I 0.878
irf6 Danio rerio ENSDARG00000101986 I 0.816
irf5.L Xenopus laevis XB-GENE-998629 D 0.735
ENSLACG00000005750 Latimeria chalumnae ENSLACG00000005750 I 0.714
ENSLOCG00000015563 Lepisosteus oculatus ENSLOCG00000015563 I 0.714