ENSPFOG00000014077 (Poecilia formosa)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSPFOG00000014077 T244324_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
IRF6
M02253_2.00
Gallus gallus
NNMCNAAWNN

NNWTTNGKNN
PBM
Weirauch et al.(2014)
pTH9178
0.817 0.817
IRF6
M02254_2.00
Meleagris gallopavo
NRNCGAWACY

RGTWTCGNYN
PBM
Weirauch et al.(2014)
pTH9210
0.829 0.829
irf6.2
M02259_2.00
Xenopus tropicalis
NVNHGAWACH

DGTWTCDNBN
PBM
Weirauch et al.(2014)
pTH9302
0.798 0.798
Irf6
M00176_2.00
Mus musculus
NNNHGADASN

NSTHTCDNNN
PBM
Badis et al.(2009)
Irf6_3803
0.769 0.769
IRF6
M05527_2.00
Homo sapiens
RGTWTCGNNNNNNYGAWACY

RGTWTCRNNNNNNCGAWACY
SELEX
Yin et al.(2017)
IRF6_eDBD_HT-SELEX
0.769 0.769
IRF6
M05529_2.00
Homo sapiens
ACCGAAACT

AGTTTCGGT
SELEX
Yin et al.(2017)
IRF6_FL_HT-SELEX
0.769 0.769
IRF6
M05528_2.00
Homo sapiens
RGTWTCGNHNNDNYGAWACY

RGTWTCRNHNNDNCGAWACY
SELEX
Yin et al.(2017)
IRF6_eDBD_Methyl-HT-SELEX
0.769 0.769
IRF6
M05530_2.00
Homo sapiens
ACCGAWACY

RGTWTCGGT
SELEX
Yin et al.(2017)
IRF6_FL_Methyl-HT-SELEX
0.769 0.769
irf5.L
M02260_2.00
Xenopus laevis
VNCGADACHN

NDGTHTCGNB
PBM
Weirauch et al.(2014)
pTH9367
0.712 0.712
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPFOP00000014123 IRF 30 133
ENSPFOP00000030875 IRF 9 114

Links

Other IRF family TFs
Other Poecilia formosa TFs

89 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSPFOG00000005876 Poecilia formosa ENSPFOG00000005876 I 0.962
ENSXMAG00000007143 Xiphophorus maculatus ENSXMAG00000007143 I 0.943
irf6 Tetraodon nigroviridis ENSTNIG00000014635 I 0.905
irf6 Takifugu rubripes ENSTRUG00000006951 I 0.905
irf6 Oryzias latipes ENSORLG00000000511 I 0.886
irf6 Gasterosteus aculeatus ENSGACG00000000990 I 0.886
ENSONIG00000018961 Oreochromis niloticus ENSONIG00000018961 I 0.867
ENSGMOG00000007988 Gadus morhua ENSGMOG00000007988 I 0.848
ENSLOCG00000011297 Lepisosteus oculatus ENSLOCG00000011297 I 0.838
Alligator_sinensis_CCG003696.1 Alligator sinensis Alligator_sinensis_CCG003696.1 I 0.838
ENSLACG00000018600 Latimeria chalumnae ENSLACG00000018600 I 0.838
IRF6 Gallus gallus ENSGALG00000001405 D 0.838
IRF6 Taeniopygia guttata ENSTGUG00000001485 I 0.829
ENSAPLG00000009319 Anas platyrhynchos ENSAPLG00000009319 I 0.829
IRF6 Meleagris gallopavo ENSMGAG00000004431 D 0.829
Alligator_sinensis_CCG015719.1 Alligator sinensis Alligator_sinensis_CCG015719.1 I 0.829
ENSPSIG00000003597 Pelodiscus sinensis ENSPSIG00000003597 I 0.829
Afo_R001981 Aptenodytes forsteri Afo_R001981 I 0.829
irf6.2 Xenopus tropicalis XB-GENE-5910331 D 0.819
IRF6 Sus scrofa ENSSSCG00000015612 I 0.819
ENSMEUG00000014941 Macropus eugenii ENSMEUG00000014941 I 0.819
IRF6 Monodelphis domestica ENSMODG00000002539 I 0.819
irf6.2.L Xenopus laevis XB-GENE-5910427 I 0.819
irf6 Xenopus tropicalis XB-GENE-876410 I 0.819
irf6.S Xenopus laevis XB-GENE-876421 I 0.819
IRF6 Anolis carolinensis ENSACAG00000005931 I 0.819
irf6 Danio rerio ENSDARG00000101986 I 0.819
Cmyd_10010684 Chelonia mydas Cmyd_10010684 I 0.819
ENSAMXG00000004616 Astyanax mexicanus ENSAMXG00000004616 I 0.819
IRF6 Ornithorhynchus anatinus ENSOANG00000013718 I 0.810
Pvit_15428 Pogona vitticeps Pvit_15428 I 0.810
IRF6 Procavia capensis ENSPCAG00000006456 I 0.800
ENSPPYG00000000253 Pongo abelii ENSPPYG00000000253 I 0.790
ENSPANG00000011328 Papio anubis ENSPANG00000011328 I 0.790
Irf6 Rattus norvegicus ENSRNOG00000005082 I 0.790
ENSTSYG00000010982 Tarsius syrichta ENSTSYG00000010982 I 0.790
IRF6 Tursiops truncatus ENSTTRG00000001121 I 0.790
IRF6 Vicugna pacos ENSVPAG00000010247 I 0.790
ENSP00000349770-D2 Bos grunniens ENSP00000349770-D2 I 0.790
ENSP00000355988 Macaca fascicularis ENSP00000355988 I 0.790
IRF6 Pteropus vampyrus ENSPVAG00000004865 I 0.790
Myotis_brandtii_IRF6_10012270 Myotis brandtii Myotis_brandtii_IRF6_10012270 I 0.790
IRF6 Pan troglodytes ENSPTRG00000001941 I 0.790
IRF6 Otolemur garnettii ENSOGAG00000010708 I 0.790
IRF6 Gorilla gorilla ENSGGOG00000006214 I 0.790
IRF6 Cavia porcellus ENSCPOG00000023829 I 0.790
IRF6 Callithrix jacchus ENSCJAG00000015032 I 0.790
ENSAMEG00000017984 Ailuropoda melanoleuca ENSAMEG00000017984 I 0.790
IRF6 Loxodonta africana ENSLAFG00000001374 I 0.790
ENSCSAG00000015263 Chlorocebus sabaeus ENSCSAG00000015263 I 0.790
IRF6 Dasypus novemcinctus ENSDNOG00000001694 I 0.790
IRF6 Equus caballus ENSECAG00000007482 I 0.790
IRF6 Felis catus ENSFCAG00000015138 I 0.790
IRF6 Homo sapiens ENSG00000117595 D 0.790
Irf6 Dipodomys ordii ENSDORG00000008891 I 0.790
IRF6 Echinops telfairi ENSETEG00000008368 I 0.790
IRF6 Choloepus hoffmanni ENSCHOG00000010399 I 0.790
ENSNLEG00000001962 Nomascus leucogenys ENSNLEG00000001962 I 0.790
ENSOARG00000012720 Ovis aries ENSOARG00000012720 I 0.790
IRF6 Bos taurus ENSBTAG00000002849 I 0.790
IRF6 Oryctolagus cuniculus ENSOCUG00000004035 I 0.790
Irf6 Mus musculus ENSMUSG00000026638 D 0.790
IRF6 Canis familiaris ENSCAFG00000011971 I 0.790
IRF6 Macaca mulatta ENSMMUG00000022065 I 0.790
IRF6 Myotis lucifugus ENSMLUG00000004509 I 0.790
ENSMPUG00000003106 Mustela putorius furo ENSMPUG00000003106 I 0.790
ENSSTOG00000028204 Ictidomys tridecemlineatus ENSSTOG00000028204 I 0.781
ENSLACG00000005750 Latimeria chalumnae ENSLACG00000005750 I 0.771
IRF6 Microcebus murinus ENSMICG00000001233 I 0.769
ENSOARG00000020948 Ovis aries ENSOARG00000020948 I 0.762
irf5 Takifugu rubripes ENSTRUG00000000641 I 0.743
irf5 Tetraodon nigroviridis ENSTNIG00000003346 I 0.743
ENSXMAG00000013056 Xiphophorus maculatus ENSXMAG00000013056 I 0.743
ENSPFOG00000013528 Poecilia formosa ENSPFOG00000013528 I 0.743
Alligator_sinensis_CCG004564.1 Alligator sinensis Alligator_sinensis_CCG004564.1 I 0.733
Pvit_14327 Pogona vitticeps Pvit_14327 I 0.733
irf5.L Xenopus laevis XB-GENE-998629 D 0.733
ENSAPLG00000006203 Anas platyrhynchos ENSAPLG00000006203 I 0.724
ENSONIG00000007600 Oreochromis niloticus ENSONIG00000007600 I 0.724
ENSGMOG00000007264 Gadus morhua ENSGMOG00000007264 I 0.721
IRF6 Ochotona princeps ENSOPRG00000014295 I 0.714
Cmyd_10002838 Chelonia mydas Cmyd_10002838 I 0.714
irf5 Xenopus tropicalis XB-GENE-998624 I 0.714
IRF5 Homo sapiens ENSG00000128604 D 0.711
irf5 Gasterosteus aculeatus ENSGACG00000000695 I 0.705
ENSLOCG00000015563 Lepisosteus oculatus ENSLOCG00000015563 I 0.705
ENSGALG00000028368 Gallus gallus ENSGALG00000028368 N 0.705
Ogr12956 Ophisaurus gracilis Ogr12956 I 0.705