CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MLOC_14305
(
Hordeum vulgare
)
Leafy
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01698 (FLO_LFY)
IPR002910
MLOC_14305
T244714_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
LFY
M02692_2.00
Arabidopsis thaliana
YWTKRACCRSYGGTYMAWR
YWTKRACCRSYGGTYMAWR
SELEX
Mathelier et al.(2014)
MA0590.1
0.812
0.812
LFY
M10895_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$LFY_Q2
0.812
0.812
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MLOC_14305.1
Leafy
1
323
MDPNDVFLAAHPFRWDLGSPAPAAVPPPPPPPPPPPALPPANAPRELEDLVVGYGVRASTVARISELGFTATTLLVMTERELDDMTAALAGLFRWDLLIGERFGLRAALRAERGRLMSPGCRHHGYQSGSTVDGAASQEVLSNERDGAASGGIGEDDAMRMMASGKKQKNGSAGRKAKKARRKKVNDLRLGMQGDEHEDGGGGLSESTESSAGGGVGGERQREHPFVVTEPGEVARAKKNGLDYLFHLYEECRVLLLQVQSMAKLHGQKAPTKVTNQVFRYASKVGASYINKPKMRHYVHCYALHCLDEDASDALRRAYKARG
MLOC_14305.2
Leafy
2
119
RMMASGKKQKNGSAGRKAKKARRKKVNDLRLGMQGDEHEDGGGGLSESTESSAGGGVGGERQREHPFVVTEPGEVARAKKNGLDYLFHLYEECRVLLLQVQSMAKLHGQKAPTKVRIA
MLOC_14305.3
Leafy
2
138
RMMASGKKQKNGSAGRKAKKARRKKVNDLRLGMQGDEHEDGGGGLSESTESSAGGGVGGERQREHPFVVTEPGEVARAKKNGLDYLFHLYEECRVLLLQVQSMAKLHGQKAPTKVTNQVFRYASKVGASYINKPKMR
Links
Other
Leafy
family TFs
Other
Hordeum vulgare
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy