Sb09g020440 (Sorghum bicolor)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 Sb09g020440 T245985_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
LBD6
M06955_2.00
Arabidopsis thaliana
CGSCGGNDDHDRCGGMGRHDN

NHDYCKCCGYHDHHNCCGSCG
Dap-seq
OMalley et al.(2016)
AS2_col_a
0.828 0.828
LOB
M06966_2.00
Arabidopsis thaliana
NVCGGCGGHRRHDRMGGMGGH

DCCKCCKYHDYYDCCGCCGBN
Dap-seq
OMalley et al.(2016)
LOB_col_a
0.707 0.707
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb09g020440.1 LOB 58 156

Links

Other LOB family TFs
Other Sorghum bicolor TFs

232 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MCYG_06344 Arthroderma otae MCYG_06344 N 0.000
e_gw1.00328.1.1 Aspergillus carbonarius e_gw1.00328.1.1 N 0.000
CADAFLAG00002121 Aspergillus flavus CADAFLAG00002121 N 0.000
AFUA_4G11480 Aspergillus fumigatus CADAFUAG00008412 N 0.000
ANIA_05583 Aspergillus nidulans CADANIAG00003495 N 0.000
CADANGAG00004220 Aspergillus niger CADANGAG00004220 N 0.000
ATEG_03933 Aspergillus terreus CADATEAG00008950 N 0.000
BDDG_05614 Blastomyces dermatitidis BDDG_05614 N 0.000
PVAR5_5743 Byssochlamys spectabilis PVAR5_5743 N 0.000
CIMG_01571 Coccidioides immitis CIMG_01571 N 0.000
CPC735_048920 Coccidioides posadasii CPC735_048920 N 0.000
MCYG_06344 Microsporum canis MCYG_06344 N 0.000
MGYG_06786 Microsporum gypseum MGYG_06786 N 0.000
PABG_03193 Paracoccidioides brasiliensis PABG_03193 N 0.000
PAAG_02713 Paracoccidioides sp lutzii PAAG_02713 N 0.000
PEX1_009280 Penicillium expansum PEX1_009280 N 0.000
PITC_068110 Penicillium italicum PITC_068110 N 0.000
PMAA_041530 Penicillium marneffei PMAA_041530 N 0.000
PDE_08462 Penicillium oxalicum PDE_08462 N 0.000
U727_00433980171 Penicillium solitum U727_00433980171 N 0.000
PMAA_041530 Talaromyces marneffei PMAA_041530 N 0.000
TSTA_075830 Talaromyces stipitatus TSTA_075830 N 0.000
H101_02628 Trichophyton interdigitale H101_02628 N 0.000
H102_01622 Trichophyton rubrum H102_01622 N 0.000
H105_01638 Trichophyton soudanense H105_01638 N 0.000
UREG_05297 Uncinocarpus reesii UREG_05297 N 0.000