Bostr.25219s0329 (Boechera stricta)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Bostr.25219s0329 T246684_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD2
M06953_2.00 		Arabidopsis thaliana
SCGANRAWDNCGGHR
YDCCGNHWTYNTCGS		 Dap-seq
OMalley et al.(2016)
LBD2_col_a 		1.000 1.000
LBD2
M06954_2.00 		Arabidopsis thaliana
SCGANAAWNTCGGDN
NHCCGANWTTNTCGS		 Dap-seq
OMalley et al.(2016)
LBD2_colamp_a 		1.000 1.000
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.25219s0329.1.p LOB 48 144
Bostr.25219s0329.2.p LOB 24 120

Links

Other LOB family TFs
Other Boechera stricta TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.1671s0259 Capsella grandiflora Cagra.1671s0259 I 1.000
Carubv10011711m.g Capsella rubella Carubv10011711m.g I 1.000
LBD2 Arabidopsis lyrata scaffold_100624.1 I 1.000
LBD2 Arabidopsis thaliana AT1G06280 D 1.000
Thhalv10008796m.g Eutrema salsugineum Thhalv10008796m.g I 0.990
Bo8g006050 Brassica oleracea Bo8g006050 I 0.969
Bra030647 Brassica rapa Bra030647 I 0.959
Bo8g114670 Brassica oleracea Bo8g114670 I 0.959
Bra032430 Brassica rapa Bra032430 I 0.918