CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000485262
(
Malus domestica
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03195 (DUF260)
IPR004883
MDP0000485262
T247127_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000485262
LOB
2
75
SCNGCRVLRKGCSDNCILRQCLQWMEDPQAQAHATVFVAKFFGRAGLFSFINAVSESQRPGIDNIFGYQIKIKV
Links
Other
LOB
family TFs
Other
Malus domestica
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MDP0000247079
Malus domestica
MDP0000247079
N
0.783
MDP0000139025
Malus domestica
MDP0000139025
N
0.783
MDP0000261146
Malus domestica
MDP0000261146
N
0.783
PRUPE_ppa022806mg
Prunus persica
PRUPE_ppa022806mg
N
0.783
Pm021281
Prunus mume
Pm021281
N
0.768
gene25541-v1.0-hybrid
Fragaria vesca
gene25541-v1.0-hybrid
N
0.725
LjSGA_036652.1
Lotus japonicus
LjSGA_036652.1
N
0.724
Solyc02g092550.2
Solanum lycopersicum
Solyc02g092550.2
N
0.710
PGSC0003DMG400024936
Solanum tuberosum
PGSC0003DMG400024936
N
0.710