CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PDK_20s1810211g001
(
Phoenix dactylifera
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03195 (DUF260)
IPR004883
PDK_20s1810211g001
T247469_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
gw1.238.28.1
M02262_2.00
Physcomitrella patens
NNNNNVNGSN
NSCNBNNNNN
PBM
Weirauch et al.(2014)
pTH8459
0.768
0.768
LBD4
M02261_2.00
Arabidopsis thaliana
VDNVCGSNNN
NNNSCGBNHB
PBM
Weirauch et al.(2014)
pTH7515
0.758
0.758
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PDK_20s1810211g001
LOB
6
104
PCASCKLLRRRCTKDCIFAPFFPSDDPHKFAMVHKVFGASNVSKMLQELPVHQRADAVSSLVYEANARMRDPVYGCVGAISFLQNQVSQLQMQLAVAQT
Links
Other
LOB
family TFs
Other
Phoenix dactylifera
TFs
274 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy