BRADI3G30457 (Brachypodium distachyon)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 BRADI3G30457 T248043_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT-GTL1
M06968_2.00
Arabidopsis thaliana
RHRGTAAAWW

WWTTTACYDY
Dap-seq
OMalley et al.(2016)
GTL1_col_a
0.886 0.725
AT-GTL1
M06969_2.00
Arabidopsis thaliana
RHRGTAAAWW

WWTTTACYDY
Dap-seq
OMalley et al.(2016)
GTL1_colamp_a
0.886 0.725
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI3G30457.1 MADF 102 173
BRADI3G30457.1 MADF 468 541

Links

Other MADF family TFs
Other Brachypodium distachyon TFs

192 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_26337 Aegilops tauschii F775_26337 I 0.945
F775_24861 Aegilops tauschii F775_24861 N 0.859
AMTR_s00002p00271480 Amborella trichopoda AMTR_s00002p00271480 N 0.813
AMTR_s00030p00088210 Amborella trichopoda AMTR_s00030p00088210 I 0.935
AMTR_s00041p00147950 Amborella trichopoda AMTR_s00041p00147950 I 0.933
Aquca_037_00343 Aquilegia coerulea Aquca_037_00343 I 0.940
scaffold_202643.1 Arabidopsis lyrata scaffold_202643.1 I 0.877
AT-GTL1 Arabidopsis lyrata fgenesh2_kg.1__3451__AT1G33240.1 I 0.886
AT-GTL1 Arabidopsis thaliana AT1G33240 D 0.886
Bostr.20129s0126 Boechera stricta Bostr.20129s0126 I 0.877
Bostr.3359s0047 Boechera stricta Bostr.3359s0047 I 0.842
BRADI5G17150 Brachypodium distachyon BRADI5G17150 I 0.942
BRADI1G77610 Brachypodium distachyon BRADI1G77610 I 0.892
Bo8g027460 Brassica oleracea Bo8g027460 I 0.850
Bo6g120870 Brassica oleracea Bo6g120870 I 0.877
Bo6g049430 Brassica oleracea Bo6g049430 I 0.889
Bo2g091240 Brassica oleracea Bo2g091240 I 0.843
Bo6g083690 Brassica oleracea Bo6g083690 I 0.877
Bra040010 Brassica rapa Bra040010 I 0.889
Bra003702 Brassica rapa Bra003702 I 0.829
Bra003703 Brassica rapa Bra003703 I 0.876
Bra008285 Brassica rapa Bra008285 I 0.865
Bra015716 Brassica rapa Bra015716 I 0.877
Bra036731 Brassica rapa Bra036731 I 0.850
PK26613.1 Cannabis sativa PK26613.1 I 0.839
PK24122.1 Cannabis sativa PK24122.1 I 0.852
Cagra.20992s0002 Capsella grandiflora Cagra.20992s0002 I 0.877
Cagra.6133s0035 Capsella grandiflora Cagra.6133s0035 I 0.880
Cagra.20992s0001 Capsella grandiflora Cagra.20992s0001 I 0.856
Carubv10008638m.g Capsella rubella Carubv10008638m.g I 0.890
Carubv10019974m.g Capsella rubella Carubv10019974m.g I 0.856
Carubv10020016m.g Capsella rubella Carubv10020016m.g I 0.877
evm.TU.supercontig_37.120 Carica papaya evm.TU.supercontig_37.120 I 0.932
evm.TU.supercontig_2611.1 Carica papaya evm.TU.supercontig_2611.1 I 0.883
evm.TU.supercontig_21.194 Carica papaya evm.TU.supercontig_21.194 I 0.893
Ca_04385 Cicer arietinum Ca_04385 I 0.865
Ca_04386 Cicer arietinum Ca_04386 I 0.863
Ca_25135 Cicer arietinum Ca_25135 I 0.865
Cla001992 Citrullus lanatus Cla001992 I 0.835
Cla005046 Citrullus lanatus Cla005046 I 0.939
Cla007910 Citrullus lanatus Cla007910 I 0.874
Ciclev10000593m.g Citrus clementina Ciclev10000593m.g I 0.875
Ciclev10018915m.g Citrus clementina Ciclev10018915m.g I 0.925
Ciclev10025533m.g Citrus clementina Ciclev10025533m.g I 0.878
Ciclev10000627m.g Citrus clementina Ciclev10000627m.g I 0.887
orange1.1g007316m.g Citrus sinensis orange1.1g007316m.g I 0.887
orange1.1g003766m.g Citrus sinensis orange1.1g003766m.g I 0.925
orange1.1g012030m.g Citrus sinensis orange1.1g012030m.g I 0.878
orange1.1g006925m.g Citrus sinensis orange1.1g006925m.g I 0.875
Cucsa.250070 Cucumis sativus Cucsa.250070 I 0.868
Cucsa.204000 Cucumis sativus Cucsa.204000 I 0.835
Cucsa.193210 Cucumis sativus Cucsa.193210 I 0.936
Thhalv10007000m.g Eutrema salsugineum Thhalv10007000m.g I 0.895
Thhalv10018297m.g Eutrema salsugineum Thhalv10018297m.g I 0.877
gene08173-v1.0-hybrid Fragaria vesca gene08173-v1.0-hybrid I 0.876
gene01828-v1.0-hybrid Fragaria vesca gene01828-v1.0-hybrid I 0.935
gene08175-v1.0-hybrid Fragaria vesca gene08175-v1.0-hybrid I 0.881
GLYMA04G39400 Glycine max GLYMA04G39400 N 0.815
GLYMA02G09060 Glycine max GLYMA02G09060 I 0.876
GLYMA10G36960 Glycine max GLYMA10G36960 I 0.859
GLYMA16G28250 Glycine max GLYMA16G28250 I 0.882
GLYMA20G30640 Glycine max GLYMA20G30640 I 0.859
GLYMA06G15500 Glycine max GLYMA06G15500 N 0.818
GLYMA10G36950 Glycine max GLYMA10G36950 I 0.870
GLYMA09G19750 Glycine max GLYMA09G19750 N 0.815
Gorai.009G253900 Gossypium raimondii Gorai.009G253900 I 0.866
Gorai.002G231500 Gossypium raimondii Gorai.002G231500 I 0.876
Gorai.003G072300 Gossypium raimondii Gorai.003G072300 I 0.929
Gorai.008G099700 Gossypium raimondii Gorai.008G099700 I 0.860
Gorai.008G262400 Gossypium raimondii Gorai.008G262400 I 0.931
Gorai.009G253700 Gossypium raimondii Gorai.009G253700 I 0.833
MLOC_70549 Hordeum vulgare MLOC_70549 I 0.901
MLOC_22988 Hordeum vulgare MLOC_22988 I 0.943
MLOC_74813 Hordeum vulgare MLOC_74813 I 0.909
LPERR02G21190 Leersia perrieri LPERR02G21190 I 0.894
LPERR03G01010 Leersia perrieri LPERR03G01010 I 0.938
LPERR04G16420 Leersia perrieri LPERR04G16420 I 0.945
LPERR10G12070 Leersia perrieri LPERR10G12070 I 0.963
Lus10018888.g Linum usitatissimum Lus10018888.g I 0.845
MDP0000156139 Malus domestica MDP0000156139 I 0.880
MDP0000701272 Malus domestica MDP0000701272 I 0.945
MDP0000451107 Malus domestica MDP0000451107 I 0.874
MDP0000451038 Malus domestica MDP0000451038 I 0.940
cassava22363.valid.m1 Manihot esculenta cassava22363.valid.m1 I 0.927
cassava22362.valid.m1 Manihot esculenta cassava22362.valid.m1 I 0.927
cassava22361.valid.m1 Manihot esculenta cassava22361.valid.m1 I 0.927
cassava21480.m1 Manihot esculenta cassava21480.m1 I 0.884
cassava16854.m1 Manihot esculenta cassava16854.m1 I 0.877
cassava16715.m1 Manihot esculenta cassava16715.m1 I 0.887
cassava2484.valid.m1 Manihot esculenta cassava2484.valid.m1 I 0.851
MTR_6g035370 Medicago truncatula MTR_6g035370 I 0.861
MTR_1g098900 Medicago truncatula MTR_1g098900 I 0.852
MTR_1g098870 Medicago truncatula MTR_1g098870 I 0.846
mgf015314m Mimulus guttatus mgf015314m N 0.825
mgf018892m Mimulus guttatus mgf018892m N 0.873
mgf021983m Mimulus guttatus mgf021983m I 0.880
mgf004276m Mimulus guttatus mgf004276m I 0.919
GSMUA_Achr11G03520_001 Musa acuminata GSMUA_Achr11G03520_001 I 0.910
GSMUA_Achr2G11910_001 Musa acuminata GSMUA_Achr2G11910_001 I 0.854
GSMUA_Achr4G24780_001 Musa acuminata GSMUA_Achr4G24780_001 I 0.836
GSMUA_Achr5G19950_001 Musa acuminata GSMUA_Achr5G19950_001 I 0.935
GSMUA_Achr9G18800_001 Musa acuminata GSMUA_Achr9G18800_001 I 0.906
GSMUA_Achr1G04100_001 Musa acuminata GSMUA_Achr1G04100_001 I 0.838
OBART04G20290 Oryza barthii OBART04G20290 I 0.942
OBART02G25970 Oryza barthii OBART02G25970 I 0.899
OB04G27270 Oryza brachyantha OB04G27270 I 0.945
OB02G33250 Oryza brachyantha OB02G33250 I 0.911
ORGLA02G0222200 Oryza glaberrima ORGLA02G0222200 I 0.899
ORGLA03G0008300 Oryza glaberrima ORGLA03G0008300 I 0.934
OGLUM03G01010 Oryza glumaepatula OGLUM03G01010 I 0.934
OGLUM02G26410 Oryza glumaepatula OGLUM02G26410 I 0.907
OGLUM04G20210 Oryza glumaepatula OGLUM04G20210 I 0.942
OGLUM10G15720 Oryza glumaepatula OGLUM10G15720 I 0.966
BGIOSGA005934 Oryza indica BGIOSGA005934 I 0.907
BGIOSGA014631 Oryza indica BGIOSGA014631 I 0.942
BGIOSGA031553 Oryza indica BGIOSGA031553 I 0.966
OLONG_017894 Oryza longistaminata OLONG_017894 I 0.940
OMERI10G12340 Oryza meridionalis OMERI10G12340 I 0.966
OMERI03G00890 Oryza meridionalis OMERI03G00890 I 0.934
ONIVA04G18520 Oryza nivara ONIVA04G18520 I 0.942
ONIVA05G15440 Oryza nivara ONIVA05G15440 I 0.907
ONIVA10G17310 Oryza nivara ONIVA10G17310 I 0.966
ONIVA03G01170 Oryza nivara ONIVA03G01170 I 0.940
OPUNC04G17930 Oryza punctata OPUNC04G17930 I 0.945
OPUNC10G14260 Oryza punctata OPUNC10G14260 I 0.962
OPUNC02G23730 Oryza punctata OPUNC02G23730 I 0.907
ORUFI02G27390 Oryza rufipogon ORUFI02G27390 I 0.907
ORUFI03G00820 Oryza rufipogon ORUFI03G00820 I 0.940
ORUFI04G21880 Oryza rufipogon ORUFI04G21880 I 0.942
ORUFI10G16810 Oryza rufipogon ORUFI10G16810 I 0.966
Pavir.Gb01188 Panicum virgatum Pavir.Gb01188 I 0.939
Pavir.Ab02437 Panicum virgatum Pavir.Ab02437 I 0.914
Pavir.Ib00103 Panicum virgatum Pavir.Ib00103 I 0.921
Pavir.Ia04768 Panicum virgatum Pavir.Ia04768 I 0.914
e_gw1.85.39.1 Physcomitrella patens e_gw1.85.39.1 I 0.908
gw1.19.47.1 Physcomitrella patens gw1.19.47.1 I 0.901
POPTR_0002s06900 Populus trichocarpa POPTR_0002s06900 I 0.895
POPTR_0005s21410 Populus trichocarpa POPTR_0005s21410 I 0.875
POPTR_0011s15050 Populus trichocarpa POPTR_0011s15050 I 0.940
POPTR_0005s21420 Populus trichocarpa POPTR_0005s21420 I 0.902
POPTR_0019s02650 Populus trichocarpa POPTR_0019s02650 I 0.869
POPTR_0001s45870 Populus trichocarpa POPTR_0001s45870 I 0.943
POPTR_0001s31660 Populus trichocarpa POPTR_0001s31660 I 0.880
POPTR_0002s06920 Populus trichocarpa POPTR_0002s06920 I 0.872
Pm022572 Prunus mume Pm022572 I 0.883
Pm001889 Prunus mume Pm001889 I 0.879
Pm022570 Prunus mume Pm022570 I 0.867
Pm024289 Prunus mume Pm024289 I 0.943
PRUPE_ppa001704mg Prunus persica PRUPE_ppa001704mg I 0.943
PRUPE_ppa002848mg Prunus persica PRUPE_ppa002848mg I 0.883
PRUPE_ppa021097mg Prunus persica PRUPE_ppa021097mg I 0.855
29576.m000223 Ricinus communis 29576.m000223 I 0.898
30068.m002635 Ricinus communis 30068.m002635 I 0.941
30206.m000769 Ricinus communis 30206.m000769 I 0.868
SapurV1A.0047s0660 Salix purpurea SapurV1A.0047s0660 I 0.936
SapurV1A.0066s0010 Salix purpurea SapurV1A.0066s0010 I 0.886
SapurV1A.0066s0020 Salix purpurea SapurV1A.0066s0020 I 0.846
SapurV1A.0231s0350 Salix purpurea SapurV1A.0231s0350 I 0.880
SapurV1A.0285s0240 Salix purpurea SapurV1A.0285s0240 I 0.948
SapurV1A.0625s0070 Salix purpurea SapurV1A.0625s0070 I 0.879
SapurV1A.0655s0060 Salix purpurea SapurV1A.0655s0060 I 0.860
SapurV1A.5612s0010 Salix purpurea SapurV1A.5612s0010 I 0.879
SapurV1A.0625s0080 Salix purpurea SapurV1A.0625s0080 I 0.896
SELMODRAFT_66294 Selaginella moellendorffii SELMODRAFT_66294 I 0.908
SELMODRAFT_120369 Selaginella moellendorffii SELMODRAFT_120369 I 0.898
SELMODRAFT_48639 Selaginella moellendorffii SELMODRAFT_48639 I 0.908
SELMODRAFT_85122 Selaginella moellendorffii SELMODRAFT_85122 I 0.898
Si034382m.g Setaria italica Si034382m.g I 0.924
Si016578m.g Setaria italica Si016578m.g I 0.902
Si012121m.g Setaria italica Si012121m.g I 0.939
Solyc12g056510.1 Solanum lycopersicum Solyc12g056510.1 I 0.903
Solyc04g071360.2 Solanum lycopersicum Solyc04g071360.2 I 0.876
PGSC0003DMG400024107 Solanum tuberosum PGSC0003DMG400024107 I 0.876
Sb01g017120 Sorghum bicolor Sb01g017120 I 0.954
Sb04g033390 Sorghum bicolor Sb04g033390 I 0.898
Sb06g023980 Sorghum bicolor Sb06g023980 I 0.934
TCM_035565 Theobroma cacao TCM_035565 I 0.876
TCM_001348 Theobroma cacao TCM_001348 I 0.870
TCM_015563 Theobroma cacao TCM_015563 I 0.935
TCM_035571 Theobroma cacao TCM_035571 I 0.887
Traes_1BL_A5A91DE10 Triticum aestivum Traes_1BL_A5A91DE10 I 0.968
Traes_2AL_9E68ABA72 Triticum aestivum Traes_2AL_9E68ABA72 I 0.938
Traes_2BL_0B80B3876 Triticum aestivum Traes_2BL_0B80B3876 I 0.945
TRIUR3_33328 Triticum urartu TRIUR3_33328 I 0.968
TRIUR3_33826 Triticum urartu TRIUR3_33826 I 0.884
VIT_18s0072g00670 Vitis vinifera VIT_18s0072g00670 I 0.900
VIT_04s0044g00510 Vitis vinifera VIT_04s0044g00510 I 0.867
AT-GTL1 Vitis vinifera VIT_02s0025g03220 I 0.935
GRMZM2G414159 Zea mays GRMZM2G414159 I 0.937
GRMZM2G169580 Zea mays GRMZM2G169580 I 0.902
GRMZM2G063203 Zea mays GRMZM2G063203 I 0.909
GRMZM2G016649 Zea mays GRMZM2G016649 I 0.934