CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0018s06120
(
Populus trichocarpa
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF10545 (MADF_DNA_bdg)
IPR006578
POPTR_0018s06120
T249684_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0018s06120.1
MADF
122
192
WGDKFLQLGRNSLRSEDWVDVAEKVSETSKIERNEAQCRQMMDVLKRRYKKEKAKGGNFSKWAYFNKMDML
Links
Other
MADF
family TFs
Other
Populus trichocarpa
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Lus10017725.g
Linum usitatissimum
Lus10017725.g
N
0.922
29912.m005554
Ricinus communis
29912.m005554
N
0.906
cassava8182.valid.m1
Manihot esculenta
cassava8182.valid.m1
N
0.896
cassava8183.valid.m1
Manihot esculenta
cassava8183.valid.m1
N
0.896