CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.16335s0035
(
Boechera stricta
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF10545 (MADF_DNA_bdg)
IPR006578
Bostr.16335s0035
T250585_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.16335s0035.1.p
MADF
32
111
VRKGNRFEDHLFSKRAWKFMSGSFTEKFKFPYGKDVLKNRHKTLRNLFKSVKNLLKEDGFSWDETRQMVNADNCVWDEYL
Bostr.16335s0035.1.p
MADF
207
272
GNQIEGVFRKQAWSEMVNLFNAKFESYFDVDVLKNRYKTLRRQFNAIKSLLRSDGFAWDDERQMVT
Bostr.16335s0035.2.p
MADF
32
111
VRKGNRFEDHLFSKRAWKFMSGSFTEKFKFPYGKDVLKNRHKTLRNLFKSVKNLLKEDGFSWDETRQMVNADNCVWDEYL
Bostr.16335s0035.2.p
MADF
207
272
GNQIEGVFRKQAWSEMVNLFNAKFESYFDVDVLKNRYKTLRRQFNAIKSLLRSDGFAWDDERQMVT
Links
Other
MADF
family TFs
Other
Boechera stricta
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo2g100340
Brassica oleracea
Bo2g100340
N
0.948
Bra018563
Brassica rapa
Bra018563
N
0.948
Cla015352
Citrullus lanatus
Cla015352
N
0.909
Lus10013421.g
Linum usitatissimum
Lus10013421.g
N
0.900
VIT_07s0005g00970
Vitis vinifera
VIT_07s0005g00970
N
0.900
cassava26969.m1
Manihot esculenta
cassava26969.m1
N
0.899
orange1.1g009421m.g
Citrus sinensis
orange1.1g009421m.g
N
0.859
Ciclev10019662m.g
Citrus clementina
Ciclev10019662m.g
N
0.859
TCM_004738
Theobroma cacao
TCM_004738
N
0.852
GLYMA03G37521
Glycine max
GLYMA03G37521
N
0.850
GLYMA19G40141
Glycine max
GLYMA19G40141
N
0.840