Lus10033504.g (Linum usitatissimum)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Lus10033504.g T250748_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10033504 MADF 38 109
Lus10033504 MADF 311 384

Links

Other MADF family TFs
Other Linum usitatissimum TFs

131 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
TRIUR3_33328 Triticum urartu TRIUR3_33328 I 0.823
cassava21480.m1 Manihot esculenta cassava21480.m1 I 0.901
cassava2484.valid.m1 Manihot esculenta cassava2484.valid.m1 I 0.817
Cucsa.204000 Cucumis sativus Cucsa.204000 I 0.900
Cucsa.250070 Cucumis sativus Cucsa.250070 I 0.878
e_gw1.85.39.1 Physcomitrella patens e_gw1.85.39.1 I 0.840
mgf004276m Mimulus guttatus mgf004276m I 0.813
mgf021983m Mimulus guttatus mgf021983m I 0.881
Aquca_037_00343 Aquilegia coerulea Aquca_037_00343 I 0.826
Bostr.20129s0126 Boechera stricta Bostr.20129s0126 I 0.893
Bostr.3359s0047 Boechera stricta Bostr.3359s0047 I 0.868
Cagra.20992s0001 Capsella grandiflora Cagra.20992s0001 I 0.904
Cagra.20992s0002 Capsella grandiflora Cagra.20992s0002 I 0.893
Carubv10019974m.g Capsella rubella Carubv10019974m.g I 0.904
cassava16854.m1 Manihot esculenta cassava16854.m1 I 0.901
cassava16715.m1 Manihot esculenta cassava16715.m1 I 0.895
30206.m000769 Ricinus communis 30206.m000769 I 0.900
AT-GTL1 Vitis vinifera VIT_02s0025g03220 I 0.820
VIT_04s0044g00510 Vitis vinifera VIT_04s0044g00510 I 0.891
VIT_18s0072g00670 Vitis vinifera VIT_18s0072g00670 I 0.899
Ca_04385 Cicer arietinum Ca_04385 I 0.876
Ca_04386 Cicer arietinum Ca_04386 I 0.872
Ca_25135 Cicer arietinum Ca_25135 I 0.893
Cla001992 Citrullus lanatus Cla001992 I 0.901
Cla005046 Citrullus lanatus Cla005046 I 0.814
Cla007910 Citrullus lanatus Cla007910 I 0.871
Pm022570 Prunus mume Pm022570 I 0.859
Pm022572 Prunus mume Pm022572 I 0.866
Pm024289 Prunus mume Pm024289 I 0.817
29576.m000223 Ricinus communis 29576.m000223 I 0.879
Carubv10020016m.g Capsella rubella Carubv10020016m.g I 0.893
Ciclev10000593m.g Citrus clementina Ciclev10000593m.g I 0.880
Ciclev10000627m.g Citrus clementina Ciclev10000627m.g I 0.888
orange1.1g012030m.g Citrus sinensis orange1.1g012030m.g I 0.869
Pavir.Gb01188 Panicum virgatum Pavir.Gb01188 I 0.825
SapurV1A.0047s0660 Salix purpurea SapurV1A.0047s0660 I 0.819
SapurV1A.0066s0010 Salix purpurea SapurV1A.0066s0010 I 0.911
SapurV1A.0066s0020 Salix purpurea SapurV1A.0066s0020 I 0.873
SapurV1A.0231s0350 Salix purpurea SapurV1A.0231s0350 I 0.889
SapurV1A.0285s0240 Salix purpurea SapurV1A.0285s0240 I 0.817
SapurV1A.0625s0070 Salix purpurea SapurV1A.0625s0070 I 0.882
SapurV1A.0625s0080 Salix purpurea SapurV1A.0625s0080 I 0.883
SapurV1A.0655s0060 Salix purpurea SapurV1A.0655s0060 I 0.824
SapurV1A.5612s0010 Salix purpurea SapurV1A.5612s0010 I 0.882
Thhalv10018297m.g Eutrema salsugineum Thhalv10018297m.g I 0.893
PK24122.1 Cannabis sativa PK24122.1 I 0.861
orange1.1g007316m.g Citrus sinensis orange1.1g007316m.g I 0.888
orange1.1g006925m.g Citrus sinensis orange1.1g006925m.g I 0.880
orange1.1g003766m.g Citrus sinensis orange1.1g003766m.g I 0.820
Ciclev10018915m.g Citrus clementina Ciclev10018915m.g I 0.820
Ciclev10025533m.g Citrus clementina Ciclev10025533m.g I 0.869
evm.TU.supercontig_21.194 Carica papaya evm.TU.supercontig_21.194 I 0.904
evm.TU.supercontig_2611.1 Carica papaya evm.TU.supercontig_2611.1 I 0.870
gene08173-v1.0-hybrid Fragaria vesca gene08173-v1.0-hybrid I 0.864
gene08175-v1.0-hybrid Fragaria vesca gene08175-v1.0-hybrid I 0.879
Gorai.002G231500 Gossypium raimondii Gorai.002G231500 I 0.879
Gorai.008G099700 Gossypium raimondii Gorai.008G099700 I 0.861
Gorai.009G253700 Gossypium raimondii Gorai.009G253700 I 0.838
Gorai.009G253900 Gossypium raimondii Gorai.009G253900 I 0.858
Lus10018888.g Linum usitatissimum Lus10018888.g I 0.861
MDP0000156139 Malus domestica MDP0000156139 I 0.879
MDP0000451107 Malus domestica MDP0000451107 I 0.872
PK26613.1 Cannabis sativa PK26613.1 I 0.886
Traes_2BL_0B80B3876 Triticum aestivum Traes_2BL_0B80B3876 I 0.826
AMTR_s00030p00088210 Amborella trichopoda AMTR_s00030p00088210 I 0.813
GLYMA10G36950 Glycine max GLYMA10G36950 I 0.885
GLYMA10G36960 Glycine max GLYMA10G36960 I 0.897
GLYMA16G28250 Glycine max GLYMA16G28250 I 0.897
GLYMA20G30640 Glycine max GLYMA20G30640 I 0.897
GSMUA_Achr5G19950_001 Musa acuminata GSMUA_Achr5G19950_001 I 0.818
LPERR04G16420 Leersia perrieri LPERR04G16420 I 0.824
LPERR10G12070 Leersia perrieri LPERR10G12070 I 0.817
MLOC_22988 Hordeum vulgare MLOC_22988 I 0.820
MTR_1g098870 Medicago truncatula MTR_1g098870 I 0.880
MTR_1g098900 Medicago truncatula MTR_1g098900 I 0.856
MTR_6g035370 Medicago truncatula MTR_6g035370 I 0.885
OB04G27270 Oryza brachyantha OB04G27270 I 0.839
OBART04G20290 Oryza barthii OBART04G20290 I 0.833
OGLUM10G15720 Oryza glumaepatula OGLUM10G15720 I 0.831
GLYMA02G09060 Glycine max GLYMA02G09060 I 0.897
F775_26337 Aegilops tauschii F775_26337 I 0.826
AMTR_s00041p00147950 Amborella trichopoda AMTR_s00041p00147950 I 0.836
BGIOSGA014631 Oryza indica BGIOSGA014631 I 0.833
BGIOSGA031553 Oryza indica BGIOSGA031553 I 0.831
Bo2g091240 Brassica oleracea Bo2g091240 I 0.883
Bo6g083690 Brassica oleracea Bo6g083690 I 0.893
Bo6g120870 Brassica oleracea Bo6g120870 I 0.893
Bo8g027460 Brassica oleracea Bo8g027460 I 0.861
Bra003702 Brassica rapa Bra003702 I 0.852
Bra003703 Brassica rapa Bra003703 I 0.894
Bra008285 Brassica rapa Bra008285 I 0.883
Bra015716 Brassica rapa Bra015716 I 0.893
Bra036731 Brassica rapa Bra036731 I 0.861
BRADI5G17150 Brachypodium distachyon BRADI5G17150 I 0.844
OGLUM04G20210 Oryza glumaepatula OGLUM04G20210 I 0.833
OLONG_017894 Oryza longistaminata OLONG_017894 I 0.826
Traes_1BL_A5A91DE10 Triticum aestivum Traes_1BL_A5A91DE10 I 0.823
POPTR_0002s06900 Populus trichocarpa POPTR_0002s06900 I 0.888
Solyc04g071360.2 Solanum lycopersicum Solyc04g071360.2 I 0.890
POPTR_0002s06920 Populus trichocarpa POPTR_0002s06920 I 0.880
POPTR_0005s21410 Populus trichocarpa POPTR_0005s21410 I 0.885
POPTR_0005s21420 Populus trichocarpa POPTR_0005s21420 I 0.896
POPTR_0019s02650 Populus trichocarpa POPTR_0019s02650 I 0.843
PRUPE_ppa001704mg Prunus persica PRUPE_ppa001704mg I 0.817
PRUPE_ppa002848mg Prunus persica PRUPE_ppa002848mg I 0.866
PRUPE_ppa021097mg Prunus persica PRUPE_ppa021097mg I 0.848
Sb01g017120 Sorghum bicolor Sb01g017120 I 0.843
scaffold_202643.1 Arabidopsis lyrata scaffold_202643.1 I 0.893
POPTR_0001s45870 Populus trichocarpa POPTR_0001s45870 I 0.817
POPTR_0001s31660 Populus trichocarpa POPTR_0001s31660 I 0.889
PGSC0003DMG400024107 Solanum tuberosum PGSC0003DMG400024107 I 0.890
OMERI10G12340 Oryza meridionalis OMERI10G12340 I 0.831
ONIVA04G18520 Oryza nivara ONIVA04G18520 I 0.833
ONIVA10G17310 Oryza nivara ONIVA10G17310 I 0.831
OPUNC04G17930 Oryza punctata OPUNC04G17930 I 0.839
OPUNC10G14260 Oryza punctata OPUNC10G14260 I 0.846
ORUFI04G21880 Oryza rufipogon ORUFI04G21880 I 0.833
TCM_035571 Theobroma cacao TCM_035571 I 0.856
TCM_035565 Theobroma cacao TCM_035565 I 0.879
TCM_001348 Theobroma cacao TCM_001348 I 0.879
ORUFI10G16810 Oryza rufipogon ORUFI10G16810 I 0.831
Solyc12g056510.1 Solanum lycopersicum Solyc12g056510.1 I 0.880
Si012121m.g Setaria italica Si012121m.g I 0.825
Solyc11g005380.1 Solanum lycopersicum Solyc11g005380.1 N 0.823
GLYMA09G19750 Glycine max GLYMA09G19750 N 0.818
Lus10020873.g Linum usitatissimum Lus10020873.g N 0.969
PGSC0003DMG400003964 Solanum tuberosum PGSC0003DMG400003964 N 0.836
gene18585-v1.0-hybrid Fragaria vesca gene18585-v1.0-hybrid N 0.857
mgf015314m Mimulus guttatus mgf015314m N 0.825
mgf018892m Mimulus guttatus mgf018892m N 0.870
GLYMA04G39400 Glycine max GLYMA04G39400 N 0.818