CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ea02688
(
Panicum virgatum
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF10545 (MADF_DNA_bdg)
IPR006578
Pavir.Ea02688
T250812_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ea02688.1.p
MADF
109
180
ISADEWLEIARLASAAADRPPGYFSETHCRNRIDTLRKQFKKEKERARLAARRGLPSAFGPVKWVYYDKMES
Links
Other
MADF
family TFs
Other
Panicum virgatum
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Eb02949
Panicum virgatum
Pavir.Eb02949
N
0.969
Pavir.Eb02985
Panicum virgatum
Pavir.Eb02985
N
0.969
TRAES3BF093600190CFD_g
Triticum aestivum
TRAES3BF093600190CFD_g
N
0.890
BRADI2G48320
Brachypodium distachyon
BRADI2G48320
N
0.882
Si002033m.g
Setaria italica
Si002033m.g
N
0.869
Sb03g033020
Sorghum bicolor
Sb03g033020
N
0.863
GRMZM2G339957
Zea mays
GRMZM2G339957
N
0.849
OS01G0718900
Oryza sativa
OS01G0718900
N
0.819
OPUNC01G28880
Oryza punctata
OPUNC01G28880
N
0.819
OGLUM01G33070
Oryza glumaepatula
OGLUM01G33070
N
0.819
OMERI01G26540
Oryza meridionalis
OMERI01G26540
N
0.819
ONIVA01G33150
Oryza nivara
ONIVA01G33150
N
0.819
BGIOSGA000906
Oryza indica
BGIOSGA000906
N
0.819
ORUFI01G32120
Oryza rufipogon
ORUFI01G32120
N
0.819