CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thhalv10003841m.g
(
Eutrema salsugineum
)
MADF,Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF10545 (MADF_DNA_bdg)
PF00249 (Myb_DNA-binding)
IPR006578
IPR014778
Thhalv10003841m.g
T252671_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10003841m
Myb
114
144
FPEFTWEHTSRKLAEVGFKRTPQECKEKFEE
Thhalv10003841m
MADF
474
550
HHRKDGISQSSSSSSKAVPLWEKISKKMLEVGYKRSAKRCKEKWENINKYFRKTKDVNKKRPLDSRTCPYFHQLTAL
Links
Other
MADF,Myb/SANT
family TFs
Other
Eutrema salsugineum
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0013s03670
Populus trichocarpa
POPTR_0013s03670
N
0.711
TCM_026383
Theobroma cacao
TCM_026383
N
0.701