MTR_1g047550 (Medicago truncatula)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 MTR_1g047550 T254702_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AGL91
M10922_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AT3G66656_01
0.750 0.750
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH41263 MADS box 10 57

Links

Other MADS box family TFs
Other Medicago truncatula TFs

56 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AGL91 Arabidopsis thaliana AT3G66656 D 0.750
LjSGA_017605.1 Lotus japonicus LjSGA_017605.1 I 0.875
Carubv10014761m.g Capsella rubella Carubv10014761m.g I 0.750
Cagra.7352s0007 Capsella grandiflora Cagra.7352s0007 I 0.729
Cagra.0133s0015 Capsella grandiflora Cagra.0133s0015 I 0.750
Bostr.23794s0666 Boechera stricta Bostr.23794s0666 I 0.729
Bostr.22252s0371 Boechera stricta Bostr.22252s0371 I 0.729
cassava10519.m1 Manihot esculenta cassava10519.m1 I 0.750
29693.m002039 Ricinus communis 29693.m002039 I 0.750
Pm030655 Prunus mume Pm030655 I 0.729
Ca_24185 Cicer arietinum Ca_24185 I 0.854
Carubv10025656m.g Capsella rubella Carubv10025656m.g I 0.729
Ciclev10017472m.g Citrus clementina Ciclev10017472m.g I 0.750
chr4.LjT16L01.50.nd Lotus japonicus chr4.LjT16L01.50.nd I 0.854
Thhalv10022154m.g Eutrema salsugineum Thhalv10022154m.g I 0.750
Thhalv10017825m.g Eutrema salsugineum Thhalv10017825m.g I 0.750
PDK_20s1551551g001 Phoenix dactylifera PDK_20s1551551g001 I 0.729
orange1.1g037442m.g Citrus sinensis orange1.1g037442m.g I 0.750
Gorai.010G165500 Gossypium raimondii Gorai.010G165500 I 0.771
gene30567-v1.0-hybrid Fragaria vesca gene30567-v1.0-hybrid I 0.771
gene14058-v1.0-hybrid Fragaria vesca gene14058-v1.0-hybrid I 0.729
evm.TU.supercontig_25.93 Carica papaya evm.TU.supercontig_25.93 I 0.792
Ca_05023 Cicer arietinum Ca_05023 I 0.938
TRIUR3_21732 Triticum urartu TRIUR3_21732 I 0.721
Traes_7BS_4D5DE99CC Triticum aestivum Traes_7BS_4D5DE99CC I 0.733
GLYMA18G20830 Glycine max GLYMA18G20830 I 0.875
GLYMA08G38880 Glycine max GLYMA08G38880 I 0.833
AGL91 Arabidopsis lyrata fgenesh2_kg.3__679__AT3G66656.1 I 0.750
AGL29 Arabidopsis lyrata fgenesh2_kg.4__1464__AT2G34440.1 I 0.729
GLYMA08G03830 Glycine max GLYMA08G03830 I 0.896
GLYMA08G03820 Glycine max GLYMA08G03820 I 0.854
GLYMA05G35811 Glycine max GLYMA05G35811 I 0.896
GLYMA05G35820 Glycine max GLYMA05G35820 I 0.875
MTR_1g054265 Medicago truncatula MTR_1g054265 I 0.896
MTR_1g063160 Medicago truncatula MTR_1g063160 I 0.896
MTR_4g131030 Medicago truncatula MTR_4g131030 I 0.938
TCM_029518 Theobroma cacao TCM_029518 I 0.792
AGL29 Arabidopsis thaliana AT2G34440 I 0.729
PRUPE_ppa024816mg Prunus persica PRUPE_ppa024816mg I 0.729
Bo4g182590 Brassica oleracea Bo4g182590 I 0.750
MTR_8g079502 Medicago truncatula MTR_8g079502 I 0.958
MTR_8g051580 Medicago truncatula MTR_8g051580 I 0.833
Bra021910 Brassica rapa Bra021910 I 0.750
SapurV1A.2238s0010 Salix purpurea SapurV1A.2238s0010 N 0.708
chr3.CM0059.60.nd Lotus japonicus chr3.CM0059.60.nd N 0.812
MDP0000274606 Malus domestica MDP0000274606 N 0.729
MDP0000120467 Malus domestica MDP0000120467 N 0.708
Cla019897 Citrullus lanatus Cla019897 N 0.708
POPTR_0004s13600 Populus trichocarpa POPTR_0004s13600 N 0.729
Aquca_054_00126 Aquilegia coerulea Aquca_054_00126 N 0.708
MTR_8g046350 Medicago truncatula MTR_8g046350 N 0.750
Eucgr.D00311 Eucalyptus grandis Eucgr.D00311 N 0.729
Eucgr.D00312 Eucalyptus grandis Eucgr.D00312 N 0.729
Eucgr.D00313 Eucalyptus grandis Eucgr.D00313 N 0.729
GLYMA08G03793 Glycine max GLYMA08G03793 N 0.833
SapurV1A.0560s0040 Salix purpurea SapurV1A.0560s0040 N 0.708