OPUNC01G41110 (Oryza punctata)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 OPUNC01G41110 T255297_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MADS50
M10968_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS50_01
0.771 0.771
squamosa
M02697_2.00
Antirrhinum majus
MYAWAWAWRGHAAN

NTTDCYWTWTWTRK
SELEX
Mathelier et al.(2014)
MA0082.1
0.729 0.729
AP1
M08144_2.00
Arabidopsis thaliana
MYAAAAAWRGAAA

TTTCYWTTTTTRK
ChIP-seq
Mathelier et al.(2014)
MA0940.1
0.729 0.729
SOC1
M08425_2.00
Arabidopsis thaliana
CCAAAAAWRGAAAND

HNTTTCYWTTTTTGG
ChIP-chip
Mathelier et al.(2014)
MA0554.1
0.729 0.729
SOC1
M10915_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL20_01
0.729 0.729
Q9LEI3_HORVU
M10985_2.00
Hordeum vulgare Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$BM3_01
0.729 0.729
MLOC_61901
M10964_2.00
Hordeum vulgare Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$BM8_01
0.729 0.729
Q9ATE8_PETHY
M11011_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP21_01
0.729 0.729
Q40591_TOBAC
M11002_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS1_03
0.729 0.729
MADS15
M10972_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS15_01
0.729 0.729
Q9FR84_MAIZE
M10981_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS3_03
0.729 0.729
AP1
M10905_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADSA_Q2
0.729 0.729
Q38742_ANTMA
M11000_2.00
Antirrhinum majus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$SQUA_01
0.729 0.729
Q41829_MAIZE
M10977_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ZAP1_02
0.729 0.729
AGL15
M06992_2.00
Arabidopsis thaliana
WNTTWCCHAAWDWRGAAAN

NTTTCYWHWTTDGGWAANW
Dap-seq
OMalley et al.(2016)
AGL15_col_a
0.708 0.708
AGL15
M06993_2.00
Arabidopsis thaliana
DNTTWCCHAAWDDRGAAANHH

DDNTTTCYHHWTTDGGWAANH
Dap-seq
OMalley et al.(2016)
AGL15_colamp_a
0.708 0.708
AGL6
M06986_2.00
Arabidopsis thaliana
TTWCCHAAAAWRGWAANWW

WWNTTWCYWTTTTDGGWAA
Dap-seq
OMalley et al.(2016)
AGL6_col_a
0.708 0.708
AGL15
M10927_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL15_01
0.708 0.708
AGL15
M10928_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL15_02
0.708 0.708
Q9LEH9_HORVU
M10983_2.00
Hordeum vulgare Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$BM9_01
0.708 0.708
Q9ATE3_PETHY
M11008_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP28_01
0.708 0.708
Q9ATE2_PETHY
M11007_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP29_01
0.708 0.708
Q7X9I6_MALDO
M11023_2.00
Malus domestica Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS12_02
0.708 0.708
MAD14_ORYSJ
M10960_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS14_01
0.708 0.708
MAD17_ORYSJ
M10961_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS17_01
0.708 0.708
MAD55_ORYSJ
M10962_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS55_01
0.708 0.708
MADS6
M10967_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS6_01
0.708 0.708
Q4U0F1_WHEAT
M10978_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$TAVRT2_01
0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OPUNC01G41110.1 MADS box 11 58

Links

Other MADS box family TFs
Other Oryza punctata TFs

630 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BOTBODRAFT_169843 Botryobasidium botryosum BOTBODRAFT_169843 N 0.000
CERSUDRAFT_122924 Ceriporiopsis subvermispora CERSUDRAFT_122924 I 0.000
CNE01220 Cryptococcus neoformans CNE01220 N 0.000
CY34DRAFT_804807 Suillus luteus CY34DRAFT_804807 N 0.000
estExt_fgeneshPB_pg.C_100077 Phycomyces blakesleeanus estExt_fgeneshPB_pg.C_100077 I 0.000
FIBRA_01283 Fibroporia radiculosa FIBRA_01283 I 0.000
FOMPIDRAFT_1125211 Fomitopsis pinicola FOMPIDRAFT_1125211 I 0.000
GALMADRAFT_239880 Galerina marginata GALMADRAFT_239880 N 0.000
GLOTRDRAFT_71884 Gloeophyllum trabeum GLOTRDRAFT_71884 N 0.000
HETIRDRAFT_239856 Heterobasidion irregulare HETIRDRAFT_239856 I 0.000
JAAARDRAFT_32137 Jaapia argillacea JAAARDRAFT_32137 N 0.000
K443DRAFT_672745 Laccaria amethystina K443DRAFT_672745 N 0.000
L804_02990 Cryptococcus gattii L804_02990 N 0.000
LACBIDRAFT_306097 Laccaria bicolor LACBIDRAFT_306097 N 0.000
M378DRAFT_157099 Amanita muscaria M378DRAFT_157099 N 0.000
M404DRAFT_122029 Pisolithus tinctorius M404DRAFT_122029 N 0.000
M407DRAFT_16768 Tulasnella calospora M407DRAFT_16768 N 0.000
M413DRAFT_105950 Hebeloma cylindrosporum M413DRAFT_105950 N 0.000
Moror_8326 Moniliophthora roreri Moror_8326 N 0.000
PHACADRAFT_208823 Phanerochaete carnosa PHACADRAFT_208823 N 0.000
PHLGIDRAFT_62123 Phlebiopsis gigantea PHLGIDRAFT_62123 N 0.000
PIIN_05400 Piriformospora indica PIIN_05400 I 0.000
PILCRDRAFT_823114 Piloderma croceum PILCRDRAFT_823114 N 0.000
SCHCODRAFT_13988 Schizophyllum commune SCHCODRAFT_13988 N 0.000
SCLCIDRAFT_1221475 Scleroderma citrinum SCLCIDRAFT_1221475 N 0.000
SERLA73DRAFT_186737 Serpula lacrymans SERLA73DRAFT_186737 N 0.000