CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400033092
(
Solanum tuberosum
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
PGSC0003DMG400033092
T255657_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400083172
MADS box
6
53
QSKKKTNNPKSYQVRKECIKRKSMELATLCDIKVCTVITGPNGELQTW
Links
Other
MADS box
family TFs
Other
Solanum tuberosum
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGSC0003DMG400026582
Solanum tuberosum
PGSC0003DMG400026582
N
0.979
PGSC0003DMG400024902
Solanum tuberosum
PGSC0003DMG400024902
N
0.958
PGSC0003DMG400026881
Solanum tuberosum
PGSC0003DMG400026881
N
0.958
PGSC0003DMG400016838
Solanum tuberosum
PGSC0003DMG400016838
N
0.938
Solyc01g103870.1
Solanum lycopersicum
Solyc01g103870.1
N
0.917
PGSC0003DMG400016835
Solanum tuberosum
PGSC0003DMG400016835
N
0.917
Solyc06g071300.1
Solanum lycopersicum
Solyc06g071300.1
N
0.917
PGSC0003DMG400036234
Solanum tuberosum
PGSC0003DMG400036234
N
0.896