CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400042000
(
Solanum tuberosum
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
PGSC0003DMG400042000
T255712_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400092429
MADS box
12
59
KITKKLARLATFSKRKKGLFRKAEELESLTSSRVTSVVFSPSGIPYTY
Links
Other
MADS box
family TFs
Other
Solanum tuberosum
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGSC0003DMG400035140
Solanum tuberosum
PGSC0003DMG400035140
N
1.000
PGSC0003DMG400022462
Solanum tuberosum
PGSC0003DMG400022462
N
0.917
PGSC0003DMG400037739
Solanum tuberosum
PGSC0003DMG400037739
N
0.854
Solyc01g098060.1
Solanum lycopersicum
Solyc01g098060.1
N
0.833
PGSC0003DMG400044662
Solanum tuberosum
PGSC0003DMG400044662
N
0.812
Solyc01g098070.1
Solanum lycopersicum
Solyc01g098070.1
N
0.771
PGSC0003DMG400022464
Solanum tuberosum
PGSC0003DMG400022464
N
0.771
PGSC0003DMG400046651
Solanum tuberosum
PGSC0003DMG400046651
N
0.708