CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400044633
(
Solanum tuberosum
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
PGSC0003DMG400044633
T255728_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400095062
MADS box
10
58
FIEDDSKRKISYYKRLKRLLKKSDELKTPCDVEVATLIYDPYRNEPCTF
Links
Other
MADS box
family TFs
Other
Solanum tuberosum
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGSC0003DMG400038225
Solanum tuberosum
PGSC0003DMG400038225
N
0.875
PGSC0003DMG400041221
Solanum tuberosum
PGSC0003DMG400041221
N
0.833
PGSC0003DMG400039358
Solanum tuberosum
PGSC0003DMG400039358
N
0.833
PGSC0003DMG400045326
Solanum tuberosum
PGSC0003DMG400045326
N
0.792
PGSC0003DMG400038060
Solanum tuberosum
PGSC0003DMG400038060
N
0.792
PGSC0003DMG400040524
Solanum tuberosum
PGSC0003DMG400040524
N
0.771
PGSC0003DMG400044997
Solanum tuberosum
PGSC0003DMG400044997
N
0.750