CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG403026197
(
Solanum tuberosum
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
PGSC0003DMG403026197
T255752_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400067392
MADS box
10
57
KIEDPTSRQQFYSKRKDTILKKSNELAVLCDVDVGLLMFSPAGEVTSY
PGSC0003DMT400067393
MADS box
10
57
KIEDPTSRQQFYSKRKDTILKKSNELAVLCDVDVGLLMFSPAGEVTSY
PGSC0003DMT400067394
MADS box
10
57
KIEDPTSRQQFYSKRKDTILKKSNELAVLCDVDVGLLMFSPAGEVTSY
Links
Other
MADS box
family TFs
Other
Solanum tuberosum
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGSC0003DMG401026197
Solanum tuberosum
PGSC0003DMG401026197
N
0.917
Solyc07g052700.2
Solanum lycopersicum
Solyc07g052700.2
N
0.750
PGSC0003DMG400045842
Solanum tuberosum
PGSC0003DMG400045842
N
0.750
Solyc06g048380.1
Solanum lycopersicum
Solyc06g048380.1
N
0.723