PRUPE_ppa010758mg (Prunus persica)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 PRUPE_ppa010758mg T255900_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SVP
M06984_2.00
Arabidopsis thaliana
DDCCVAAWANGGHAA

TTDCCNTWTTBGGHH
Dap-seq
OMalley et al.(2016)
SVP_colamp_v3b
0.729 0.729
SVP
M06985_2.00
Arabidopsis thaliana
CCMAAWANGGWAANW

WNTTWCCNTWTTKGG
Dap-seq
OMalley et al.(2016)
SVP_col_v3b
0.729 0.729
SVP
M08424_2.00
Arabidopsis thaliana
NWWHCCMAAAADGGAAARHH

DDYTTTCCHTTTTKGGDWWN
ChIP-chip
Mathelier et al.(2014)
MA0555.1
0.729 0.729
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EMJ25047 MADS box 13 60

Links

Other MADS box family TFs
Other Prunus persica TFs

124 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MTR_2g005240 Medicago truncatula MTR_2g005240 I 0.000
GLYMA16G00220 Glycine max GLYMA16G00220 I 0.000
MLOC_64596 Hordeum vulgare MLOC_64596 I 0.000
Eucgr.G00076 Eucalyptus grandis Eucgr.G00076 I 0.000
BRADI4G17410 Brachypodium distachyon BRADI4G17410 I 0.000
PGSC0003DMG400020711 Solanum tuberosum PGSC0003DMG400020711 I 0.000
TCM_027113 Theobroma cacao TCM_027113 I 0.000
POPTR_0004s23770 Populus trichocarpa POPTR_0004s23770 I 0.000
SapurV1A.0422s0040 Salix purpurea SapurV1A.0422s0040 I 0.000
LjSGA_022281.1 Lotus japonicus LjSGA_022281.1 I 0.000
PK12669.1 Cannabis sativa PK12669.1 I 0.000
ARF1 Vitis vinifera VIT_12s0035g01800 I 0.000
Cla001927 Citrullus lanatus Cla001927 N 0.000
Cla015243 Citrullus lanatus Cla015243 N 0.000
Pm003827 Prunus mume Pm003827 N 0.000
29609.m000587 Ricinus communis 29609.m000587 N 0.000
29742.m001397 Ricinus communis 29742.m001397 N 0.000
Si025988m.g Setaria italica Si025988m.g N 0.000
Ca_17636 Cicer arietinum Ca_17636 N 0.000
VIT_18s0089g00910 Vitis vinifera VIT_18s0089g00910 N 0.000
ONIVA12G12070 Oryza nivara ONIVA12G12070 N 0.000
TRIUR3_33501 Triticum urartu TRIUR3_33501 N 0.000
Traes_2DL_A86E54838 Triticum aestivum Traes_2DL_A86E54838 N 0.000
Traes_2AL_89543BA1A Triticum aestivum Traes_2AL_89543BA1A N 0.000
Solyc01g103050.2 Solanum lycopersicum Solyc01g103050.2 N 0.000
cassava11453.m1 Manihot esculenta cassava11453.m1 N 0.000
cassava11454.m1 Manihot esculenta cassava11454.m1 N 0.000
Thhalv10023326m.g Eutrema salsugineum Thhalv10023326m.g N 0.000
SapurV1A.0225s0120 Salix purpurea SapurV1A.0225s0120 N 0.000
Lus10007440.g Linum usitatissimum Lus10007440.g N 0.000
Gorai.011G091100 Gossypium raimondii Gorai.011G091100 N 0.000
Ciclev10000491m.g Citrus clementina Ciclev10000491m.g N 0.000
Carubv10022415m.g Capsella rubella Carubv10022415m.g N 0.000
Carubv10006513m.g Capsella rubella Carubv10006513m.g N 0.000
Cagra.1226s0063 Capsella grandiflora Cagra.1226s0063 N 0.000
Cagra.0996s0001 Capsella grandiflora Cagra.0996s0001 N 0.000
Bostr.10040s0256 Boechera stricta Bostr.10040s0256 N 0.000
Aquca_100_00036 Aquilegia coerulea Aquca_100_00036 N 0.000
mgf006427m Mimulus guttatus mgf006427m N 0.000
Cucsa.183410 Cucumis sativus Cucsa.183410 N 0.000
cassava7099.valid.m1 Manihot esculenta cassava7099.valid.m1 N 0.000
cassava7098.valid.m1 Manihot esculenta cassava7098.valid.m1 N 0.000
cassava11456.m1 Manihot esculenta cassava11456.m1 N 0.000
cassava11455.m1 Manihot esculenta cassava11455.m1 N 0.000
Sb04g022830 Sorghum bicolor Sb04g022830 N 0.000
OBART02G20600 Oryza barthii OBART02G20600 N 0.000
OB01G51580 Oryza brachyantha OB01G51580 N 0.000
MTR_8g027440 Medicago truncatula MTR_8g027440 N 0.000
MLOC_18401 Hordeum vulgare MLOC_18401 N 0.000
LPERR02G16580 Leersia perrieri LPERR02G16580 N 0.000
GSMUA_Achr6G16450_001 Musa acuminata GSMUA_Achr6G16450_001 N 0.000
GSMUA_Achr2G19760_001 Musa acuminata GSMUA_Achr2G19760_001 N 0.000
GLYMA12G28550 Glycine max GLYMA12G28550 N 0.000
GLYMA07G40270 Glycine max GLYMA07G40270 N 0.000
ARF1 Arabidopsis lyrata fgenesh2_kg.2__468__AT1G59750.1 N 0.000
Bra035427 Brassica rapa Bra035427 N 0.000
Bo4g083590 Brassica oleracea Bo4g083590 N 0.000
Bo1g090350 Brassica oleracea Bo1g090350 N 0.000
BGIOSGA036199 Oryza indica BGIOSGA036199 N 0.000
BGIOSGA008429 Oryza indica BGIOSGA008429 N 0.000
ARF1 Arabidopsis thaliana AT1G59750 N 0.000
OBART12G11990 Oryza barthii OBART12G11990 N 0.000
OGLUM02G20880 Oryza glumaepatula OGLUM02G20880 N 0.000
OGLUM12G13560 Oryza glumaepatula OGLUM12G13560 N 0.000
PRUPE_ppa002394mg Prunus persica PRUPE_ppa002394mg N 0.000
POPTR_0003s00890 Populus trichocarpa POPTR_0003s00890 N 0.000
ARF24 Oryza sativa OS12G0479400 N 0.000
ARF7 Oryza sativa OS02G0557200 N 0.000
ORUFI12G13110 Oryza rufipogon ORUFI12G13110 N 0.000
ORUFI02G21640 Oryza rufipogon ORUFI02G21640 N 0.000
ORGLA12G0109100 Oryza glaberrima ORGLA12G0109100 N 0.000
ORGLA02G0176700 Oryza glaberrima ORGLA02G0176700 N 0.000
OPUNC12G10620 Oryza punctata OPUNC12G10620 N 0.000
OPUNC02G18520 Oryza punctata OPUNC02G18520 N 0.000
ONIVA02G22590 Oryza nivara ONIVA02G22590 N 0.000
OMERI12G08550 Oryza meridionalis OMERI12G08550 N 0.000
OMERI02G20310 Oryza meridionalis OMERI02G20310 N 0.000
OLONG_019549 Oryza longistaminata OLONG_019549 N 0.000
OLONG_012362 Oryza longistaminata OLONG_012362 N 0.000
OLONG_010675 Oryza longistaminata OLONG_010675 N 0.000
AMTR_s00021p00221770 Amborella trichopoda AMTR_s00021p00221770 N 0.000