CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Sb03g027580
(
Sorghum bicolor
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
Sb03g027580
T256052_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb03g027580.1
MADS box
13
60
FIENGRDRSLTYFKRRSGLFKAASDLSTLTGARVAVVLESEHGKFSSF
Links
Other
MADS box
family TFs
Other
Sorghum bicolor
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sb03g027570
Sorghum bicolor
Sb03g027570
N
0.958
GRMZM2G375707
Zea mays
GRMZM2G375707
N
0.917
Pavir.Ea02149
Panicum virgatum
Pavir.Ea02149
N
0.812
Pavir.Eb02038
Panicum virgatum
Pavir.Eb02038
N
0.812
Si003866m.g
Setaria italica
Si003866m.g
N
0.792
Pavir.Bb00235
Panicum virgatum
Pavir.Bb00235
N
0.729
Pavir.J10201
Panicum virgatum
Pavir.J10201
N
0.708
Si003888m.g
Setaria italica
Si003888m.g
N
0.708